PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN10019.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 841aa MW: 90046.4 Da PI: 7.903

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN10019.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.7	6.6e-16	583	629	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eY+k Lq PIN10019.1 583 VHNLSERRRRDRINEKMRALQELIPNC-----NKADKASMLDEAIEYLKTLQ 629 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 841 aa Download sequence
MPLSEFLRMA RGKLESGQKK PSPTDLLSRP NDELVELVWE NGQIMMQGQS SRVTRSPAVN 60 NLPSNTPKFR EPSTSRIGKF GGVESILNDM SPVVPSGDLD LSQDDEMVPW LSYPMDGALA 120 QDYGSELLPE ISGVTANGMS TQNSFVSVDK RSSCDQTVSN LHSGGSTFKG SSSSSSSSSS 180 SKARPIYPWL RHRQTSDALG SGASDVISNN TSNYPDAVFG SPSQGRDIVK DSTNTKMERQ 240 NTGPPSNLLN FFHFSRPAAL VKANLQNSDR IPASVLQNSF VSVDKRSSCD QTVSNLHSGG 300 STFKGSSSSS SSSSSSKARP IYPWLRHRQT SDALGSGASD VISNNTSNYP DAVFGSPSQG 360 RDIVKDSTNT KMERQNTGPP SNLLNFFHFS RPAALVKANL QNSDRIPASV SSGVEMLEVK 420 EKGSTVGGSN LVRSAIFDQS NSIQKDIGIQ VSSANVSMAN SRQPMLKAPK ESCPAERTDN 480 LCRETSITND MPVNVSNNTA NSTKGVQDCE KTVEPVAASS SVGSGNSADR VSCEQTHNSK 540 RKFRDMEESE CRSDEIETES IGVKKPTPAR GGTGSKRSRA AEVHNLSERR RRDRINEKMR 600 ALQELIPNCN KADKASMLDE AIEYLKTLQL QVQIMSMGAG LCMPPMMFPT GMQHMHPAHV 660 PHFPPMGVGM GMGMGYGMGM VDMNGGSPGC PMFPVPHFPS PMSGPANFQR LQGPNLPVYG 720 HPSHGLPTSV PRPPLVPLNT RLPVTSAVGL SASRNGNHNE VHNASPILNS GEPMTNTKSQ 780 LMNNGEAGSS TNHTCDKVQV TNETLDQPTA AQQNKQATDG RPPAGLAPTT AGDISKEPGC 840 D

Sequence ? help Back to Top

Protein Sequence Length: 841 aa Download sequence

MPLSEFLRMA RGKLESGQKK PSPTDLLSRP NDELVELVWE NGQIMMQGQS SRVTRSPAVN  60
NLPSNTPKFR EPSTSRIGKF GGVESILNDM SPVVPSGDLD LSQDDEMVPW LSYPMDGALA  120
QDYGSELLPE ISGVTANGMS TQNSFVSVDK RSSCDQTVSN LHSGGSTFKG SSSSSSSSSS  180
SKARPIYPWL RHRQTSDALG SGASDVISNN TSNYPDAVFG SPSQGRDIVK DSTNTKMERQ  240
NTGPPSNLLN FFHFSRPAAL VKANLQNSDR IPASVLQNSF VSVDKRSSCD QTVSNLHSGG  300
STFKGSSSSS SSSSSSKARP IYPWLRHRQT SDALGSGASD VISNNTSNYP DAVFGSPSQG  360
RDIVKDSTNT KMERQNTGPP SNLLNFFHFS RPAALVKANL QNSDRIPASV SSGVEMLEVK  420
EKGSTVGGSN LVRSAIFDQS NSIQKDIGIQ VSSANVSMAN SRQPMLKAPK ESCPAERTDN  480
LCRETSITND MPVNVSNNTA NSTKGVQDCE KTVEPVAASS SVGSGNSADR VSCEQTHNSK  540
RKFRDMEESE CRSDEIETES IGVKKPTPAR GGTGSKRSRA AEVHNLSERR RRDRINEKMR  600
ALQELIPNCN KADKASMLDE AIEYLKTLQL QVQIMSMGAG LCMPPMMFPT GMQHMHPAHV  660
PHFPPMGVGM GMGMGYGMGM VDMNGGSPGC PMFPVPHFPS PMSGPANFQR LQGPNLPVYG  720
HPSHGLPTSV PRPPLVPLNT RLPVTSAVGL SASRNGNHNE VHNASPILNS GEPMTNTKSQ  780
LMNNGEAGSS TNHTCDKVQV TNETLDQPTA AQQNKQATDG RPPAGLAPTT AGDISKEPGC  840
D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	588	593	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	2e-46	bHLH family protein