PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN09918.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 346aa MW: 38254.5 Da PI: 9.2574

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN09918.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.7	9.9e-06	61	83	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k + +s++k H++t+ PIN09918.1 61 WVCEKCSKAYAVQSDYKAHLKTC 83 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MHRRRHKVPW KLLKRETPIA KKRVFVCPEP SCLHHDPCHA LGDLVGIKKH FRRKHSNQKQ 60 WVCEKCSKAY AVQSDYKAHL KTCGTRGHSC DCGRVFSRVE SFIEHQDACS MGRLRSDPHP 120 LQPPPPCLSR TASSPSPSSD TNLSVAPWAT AAGPPSTLPN PIEPILLHNT ADFTRAASAS 180 NPPNLELQLL TNADTSAGPT STKLNENHST QLQLSIGSSE IINGEKTEAD TTNVSCITSE 240 KSIVTAARMK EEAEEARRHA RRQMELAEME FANAKRIRRQ AQAELEKAQA LKEHAMKEMN 300 SAVLQITCHS CKKVFADASS AAASSLGLSY ISAKLREWDV KKGDQK

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MHRRRHKVPW KLLKRETPIA KKRVFVCPEP SCLHHDPCHA LGDLVGIKKH FRRKHSNQKQ  60
WVCEKCSKAY AVQSDYKAHL KTCGTRGHSC DCGRVFSRVE SFIEHQDACS MGRLRSDPHP  120
LQPPPPCLSR TASSPSPSSD TNLSVAPWAT AAGPPSTLPN PIEPILLHNT ADFTRAASAS  180
NPPNLELQLL TNADTSAGPT STKLNENHST QLQLSIGSSE IINGEKTEAD TTNVSCITSE  240
KSIVTAARMK EEAEEARRHA RRQMELAEME FANAKRIRRQ AQAELEKAQA LKEHAMKEMN  300
SAVLQITCHS CKKVFADASS AAASSLGLSY ISAKLREWDV KKGDQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68130.2	1e-81	C2H2 family protein