PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN09905.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Trihelix

Protein Properties

Length: 476aa MW: 51648.9 Da PI: 7.4765

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN09905.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	57	5.2e-18	88	173	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +L+ea++e+ +l+rg+l++ +Weev+ ++er ++s +qCk+k +nl+kryk ++++ +++ +s ++p+f+q+e PIN09905.1 88 EWSDTAIACLLEAYTEKFLQLNRGNLRGRDWEEVATIVSERCEkTKSVEQCKNKVDNLKKRYKLERHRLSNGGVLVS-HWPWFKQME 173 5***********************************77755378*********************966665.9*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MASCDDDFSL LDDHHNPNSS QPSTTNQTPP YQITPFDPDS DPFDSEPDPN SLSGKRPNDR 60 DDVHGGTPKR TRMPSAGGSG DYRKDREEWS DTAIACLLEA YTEKFLQLNR GNLRGRDWEE 120 VATIVSERCE KTKSVEQCKN KVDNLKKRYK LERHRLSNGG VLVSHWPWFK QMEQVVGNSL 180 AAKAASEEDR SPGGGGSSYS TRQSKRFGTT TSPGGQIISV KKASMNPRRR RVVFKISGGA 240 LAGNNALSGT APNNMDPKMV MLIAREVSIA CRGGVEVAIV VGGRNFFCGD TWVTSTGSDR 300 STAYQIGMLA TVMNSILLQS ALEKLGVQAR VQSAFSMPEV TEPYNRQRAI RHLEKGRVVI 360 FGGVGAGTGN PLFSTDTAAA LRASEIHADT VLKGTNMDAV YVCDSRNNNI AAEHISFREL 420 ASRGACASLM DIMALTFCEE NGIPVVVFNL HEPGNISRAL SGEQVGTLVD QTGPLS

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MASCDDDFSL LDDHHNPNSS QPSTTNQTPP YQITPFDPDS DPFDSEPDPN SLSGKRPNDR  60
DDVHGGTPKR TRMPSAGGSG DYRKDREEWS DTAIACLLEA YTEKFLQLNR GNLRGRDWEE  120
VATIVSERCE KTKSVEQCKN KVDNLKKRYK LERHRLSNGG VLVSHWPWFK QMEQVVGNSL  180
AAKAASEEDR SPGGGGSSYS TRQSKRFGTT TSPGGQIISV KKASMNPRRR RVVFKISGGA  240
LAGNNALSGT APNNMDPKMV MLIAREVSIA CRGGVEVAIV VGGRNFFCGD TWVTSTGSDR  300
STAYQIGMLA TVMNSILLQS ALEKLGVQAR VQSAFSMPEV TEPYNRQRAI RHLEKGRVVI  360
FGGVGAGTGN PLFSTDTAAA LRASEIHADT VLKGTNMDAV YVCDSRNNNI AAEHISFREL  420
ASRGACASLM DIMALTFCEE NGIPVVVFNL HEPGNISRAL SGEQVGTLVD QTGPLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	0.0	Trihelix family protein