PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN09902.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Trihelix

Protein Properties

Length: 463aa MW: 52482.5 Da PI: 5.9531

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN09902.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	78.8	7.9e-25	116	215	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdql 85 +Wt+++v++Li ++ +++++++++ +kk++W++vs++m+ergf +sp+qC++k+++lnkryk+++++ +k+ +++++++ +++d + PIN09902.1 116 KWTDNMVRLLIMVVYYIGDEVSSEGndssgkkkgggvlQKKGKWKSVSQAMMERGFYVSPQQCEDKFNDLNKRYKRVNDILGKGtSCRVVENQSLLDTM 214 7************99999886433566788999999******************************************669********99 PP trihelix 86 e 86 + PIN09902.1 215 D 215 8 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MESNSMSSGG IYSNVQPGML GLEMSLHHPV PPQNPPNSHR MRPPPPQSHH PMAAYGHHDG 60 DYHQQPPQTT KPNYPFSAKS KNQSLTLSDD EEPGFAAETS AADDGKRKMS PWQRMKWTDN 120 MVRLLIMVVY YIGDEVSSEG NDSSGKKKGG GVLQKKGKWK SVSQAMMERG FYVSPQQCED 180 KFNDLNKRYK RVNDILGKGT SCRVVENQSL LDTMDHLSPK TKEEVKKLLN SKHLFFREMC 240 AYHNSCGHGS GGGGGGSGGV QNSPPEAAAQ PAQRCLHSSE NVSNEGAKLG KGIEDEEDDD 300 ENDEDIEDED DEDEDDDDDD ADTDERSTRK KMKRGNLTLP LQSPLMQQLE VEISNVFQDL 360 SKGPKEKRQW MKAKIMRLEE QRVGIQTQVF ELEKQRLKWL KFSSKKEREM EREKMANEKT 420 KLENERMVLL VRQKELDLME FQQRQQQQQY SSNKKSDPSS ITG

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MESNSMSSGG IYSNVQPGML GLEMSLHHPV PPQNPPNSHR MRPPPPQSHH PMAAYGHHDG  60
DYHQQPPQTT KPNYPFSAKS KNQSLTLSDD EEPGFAAETS AADDGKRKMS PWQRMKWTDN  120
MVRLLIMVVY YIGDEVSSEG NDSSGKKKGG GVLQKKGKWK SVSQAMMERG FYVSPQQCED  180
KFNDLNKRYK RVNDILGKGT SCRVVENQSL LDTMDHLSPK TKEEVKKLLN SKHLFFREMC  240
AYHNSCGHGS GGGGGGSGGV QNSPPEAAAQ PAQRCLHSSE NVSNEGAKLG KGIEDEEDDD  300
ENDEDIEDED DEDEDDDDDD ADTDERSTRK KMKRGNLTLP LQSPLMQQLE VEISNVFQDL  360
SKGPKEKRQW MKAKIMRLEE QRVGIQTQVF ELEKQRLKWL KFSSKKEREM EREKMANEKT  420
KLENERMVLL VRQKELDLME FQQRQQQQQY SSNKKSDPSS ITG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	8e-91	Trihelix family protein