PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN09852.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 505aa MW: 54540.9 Da PI: 7.0669

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN09852.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.3	3.3e-09	332	379	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq PIN09852.1 332 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 379 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MMDKNYFMNA GIPPPQPLHF DTAAPPPWGG LNSTAEHSFL NPNTSMEQFS QFESALSSMV 60 SCSTASSSGL SSDAFGLREL IGKLGSIGSS TTFPPPATAA SPFPGTNIRS SHDSAKLHLP 120 ILDQINMPNL GNSVAITPPL ASLSGDPGFA ERAAKFSCFG SRSVNGRSSP LGLNNGELGH 180 GSSSLLMGNG KLPRVSSTPS LKQLENKNIR QSQMETRPEN GKKLSNSNDE SSVSEQIPSG 240 ETGSKTSNEL NSRKRKAVSR GKATPAKGVE GDEDGNAKRS KPQESGKNET KTEEAKEGSK 300 DESEKQKTNQ KPPEPPKDYI HVRARRGQAT DSHSLAERVR REKISERMKL LQDLVPGCNK 360 VTGKALMLDE IINYVQSLQR QVEFLSMKLA SVNPGLDFNM ENLLSKDMFQ QNATLPQQMY 420 PLDSSAPAFY HQNTQQNNTN ISSGPLSHCS VDPLPLGIQL PSVDGFSDNL PQFPAFSEDD 480 LHSIVQMGFV NFPVSNPTAN MKVEP

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MMDKNYFMNA GIPPPQPLHF DTAAPPPWGG LNSTAEHSFL NPNTSMEQFS QFESALSSMV  60
SCSTASSSGL SSDAFGLREL IGKLGSIGSS TTFPPPATAA SPFPGTNIRS SHDSAKLHLP  120
ILDQINMPNL GNSVAITPPL ASLSGDPGFA ERAAKFSCFG SRSVNGRSSP LGLNNGELGH  180
GSSSLLMGNG KLPRVSSTPS LKQLENKNIR QSQMETRPEN GKKLSNSNDE SSVSEQIPSG  240
ETGSKTSNEL NSRKRKAVSR GKATPAKGVE GDEDGNAKRS KPQESGKNET KTEEAKEGSK  300
DESEKQKTNQ KPPEPPKDYI HVRARRGQAT DSHSLAERVR REKISERMKL LQDLVPGCNK  360
VTGKALMLDE IINYVQSLQR QVEFLSMKLA SVNPGLDFNM ENLLSKDMFQ QNATLPQQMY  420
PLDSSAPAFY HQNTQQNNTN ISSGPLSHCS VDPLPLGIQL PSVDGFSDNL PQFPAFSEDD  480
LHSIVQMGFV NFPVSNPTAN MKVEP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	7e-94	bHLH family protein