PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN09810.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 493aa MW: 53725.9 Da PI: 7.2695

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN09810.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.2	1.6e-09	315	362	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ah+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq PIN09810.1 315 AHSLAERVRREKISERMKVLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 362 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence
MGKENMFLNE LNSSLFNPNW EDQNDPFESA LSSMVSSPTA SNANGNGGEN VVLRELIGRL 60 GSICNNGEIS PYNSINGNNS ANASCYSTPL NSPPKLNLEN HHQIRGNLQI PGKNFASLPN 120 LAPFPTDPGF AERAARFSCF ANKSLMGLNE MPTKLESGKI SRVSSNQSIK ICGSNPMGIH 180 EEGGISGSDK KFSGVSRSST PENGEFGDSR ENSSVSEQIP GGETGINPQN DANSRKRKSI 240 PRGKGKETPP AATPVKDANV ASENSESSAK RSKSEDETKT KVDTNQKQSK DNSKPPEPPK 300 DYIHVRARRG QATDAHSLAE RVRREKISER MKVLQDLVPG CNKVTGKAVM LDEIINYVQS 360 LQRQVEFLSM KLATVNPRMD FNMETLMSKD MFPSRGPPLP NNIFPSDSYP FQSQPHLHTA 420 IPSGSEALVL TNNFNAALGK NQLPPMDNFS GNASQVSTFW EDDLHSIVQM GFGQNQTQSF 480 HGILPTSQMK VEL

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence

MGKENMFLNE LNSSLFNPNW EDQNDPFESA LSSMVSSPTA SNANGNGGEN VVLRELIGRL  60
GSICNNGEIS PYNSINGNNS ANASCYSTPL NSPPKLNLEN HHQIRGNLQI PGKNFASLPN  120
LAPFPTDPGF AERAARFSCF ANKSLMGLNE MPTKLESGKI SRVSSNQSIK ICGSNPMGIH  180
EEGGISGSDK KFSGVSRSST PENGEFGDSR ENSSVSEQIP GGETGINPQN DANSRKRKSI  240
PRGKGKETPP AATPVKDANV ASENSESSAK RSKSEDETKT KVDTNQKQSK DNSKPPEPPK  300
DYIHVRARRG QATDAHSLAE RVRREKISER MKVLQDLVPG CNKVTGKAVM LDEIINYVQS  360
LQRQVEFLSM KLATVNPRMD FNMETLMSKD MFPSRGPPLP NNIFPSDSYP FQSQPHLHTA  420
IPSGSEALVL TNNFNAALGK NQLPPMDNFS GNASQVSTFW EDDLHSIVQM GFGQNQTQSF  480
HGILPTSQMK VEL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	234	239	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	1e-92	bHLH family protein