PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN09737.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

GeBP

Protein Properties

Length: 392aa MW: 43052.7 Da PI: 5.0086

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN09737.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	110.5	1.1e-34	93	195	1	98
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgk.....spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 klfqrlw++eDei lLqG++d+++++ + ++d++afy+++k++ +++++k+qlveK+rrLKkK+++ +k +sgke +f+++h+q +fe+s+k PIN09737.1 93 KLFQRLWTDEDEIELLQGFLDYTTQRCGphsssQHHHDTTAFYDQIKSKFQLEFNKNQLVEKLRRLKKKYRNVINKFSSGKEYTFKSNHEQATFEISSK 191 579*****************999854465535556********************************************************** PP DUF573 95 iWgs 98 iWgs PIN09737.1 192 IWGS 195 95 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MASAGDPTAA AAGNIFNEDE DLLDDDDDDE ISDHDEDESA SSAAIAVDRP PPPTSVAQVT 60 IAVPGVPDPH LKQQQQQEIV ITKKPAQPDE SRKLFQRLWT DEDEIELLQG FLDYTTQRCG 120 PHSSSQHHHD TTAFYDQIKS KFQLEFNKNQ LVEKLRRLKK KYRNVINKFS SGKEYTFKSN 180 HEQATFEISS KIWGSSAVVN VNGSSAFRAG PAPTEEEDDE LNNSNFADCQ SPSRNGIDVN 240 SKTPRSRKRS RAGAVKVEEK QNHPANSNIN NTPPSAAVTP VAAPVTGLGM TGSMSSVIEE 300 TVKSCLSPIF KELLSNSMSS IPNPSGLCCG HGFGSARSAI PLCFTGAIGG DKTTNDRWRK 360 QQILELEVLS KRLELVQDEI REQLQELRSM GN

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MASAGDPTAA AAGNIFNEDE DLLDDDDDDE ISDHDEDESA SSAAIAVDRP PPPTSVAQVT  60
IAVPGVPDPH LKQQQQQEIV ITKKPAQPDE SRKLFQRLWT DEDEIELLQG FLDYTTQRCG  120
PHSSSQHHHD TTAFYDQIKS KFQLEFNKNQ LVEKLRRLKK KYRNVINKFS SGKEYTFKSN  180
HEQATFEISS KIWGSSAVVN VNGSSAFRAG PAPTEEEDDE LNNSNFADCQ SPSRNGIDVN  240
SKTPRSRKRS RAGAVKVEEK QNHPANSNIN NTPPSAAVTP VAAPVTGLGM TGSMSSVIEE  300
TVKSCLSPIF KELLSNSMSS IPNPSGLCCG HGFGSARSAI PLCFTGAIGG DKTTNDRWRK  360
QQILELEVLS KRLELVQDEI REQLQELRSM GN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	5e-78	GeBP family protein