PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN09647.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 218aa    MW: 24330.4 Da    PI: 5.5017
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN09647.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.91.9e-11103143255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g W              r++lg+f+ta   aka+++a+ k++g
  PIN09647.1 103 HYRGVRRRP-WGNWG------------SRVWLGTFDTAVAVAKAYDKAAFKMRG 143
                 8********.***88............89***********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MANPAEVSAV ERIRIHLLGE FSTGELDNDA STSGTLASSV ASSEFDSLYS QLSTCDSGLS  60
IPDNSLAKPS LRIEVPEAGR KFELIKFECN AAGEEEEDKE KKHYRGVRRR PWGNWGSRVW  120
LGTFDTAVAV AKAYDKAAFK MRGSKAILNF PLEIQLQERG ASDVERKRRR EVEEGEIVGF  180
GQLKMGKREA AVKSEITEWE PLTPSFWQLS RYLPILSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1166170RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.13e-18ERF family protein