PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN09614.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 324aa    MW: 36472.1 Da    PI: 4.8588
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN09614.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.91.2e-10140183755
                 HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 + ErrRR r+++++  Lr+l+P+      +K++Ka+i+  Av Y++ Lq
  PIN09614.1 140 ISERRRRGRMKEKLYALRSLVPNI-----TKMDKASIVGDAVLYVQGLQ 183
                 67*********************7.....7*****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MERVQEENGL LIPLDHYTND FGLIDFMDEA NLDQFIDLIR GENEPQSIAD FSSQDYENSF  60
DGHFLPPVEL FDLDVAAGYV ASNGNADFSM ENACQKAADR EEIMDGEESS AITMTTTTMP  120
DTPTTMKKKS NKVDRSRTLI SERRRRGRMK EKLYALRSLV PNITKMDKAS IVGDAVLYVQ  180
GLQTQAKKLK SEISSLESSL KERDKYNGRS TTQNSKKIDA ANFCPISKKI FKVDVFQVEE  240
RGFYIRIVSN KGRGVAVSLY KALESLGTFH VQSSNLAASA ENYVFTFTLH IMEPEMDVNL  300
PNLKLWIASI FLNQGFEFEA SQSA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1127146KKKSNKVDRSRTLISERRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.12e-62bHLH family protein