PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN09589.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | FAR1 | ||||||||
Protein Properties | Length: 153aa MW: 18044.3 Da PI: 8.4861 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 69.1 | 1.1e-21 | 57 | 145 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 fY +Y+++ GF+vr+ ++k+ ++ +++ ++vCs+ g+r++ k +++ +rr+r+etr+gC+a+++v ++ dg ++vt+++l HnH+l PIN09589.1 57 FYWNYGRQNGFDVRRCHKKTV-NDSLVKNVEWVCSRVGFRQPLKYEAKCKRRPREETRCGCEARFRVAHDQhDGLYKVTEFVLFHNHALE 145 9**************998877.8888******************************************9999****************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence |
MDEDKRKRQC YGNSVDDKSD RSLDAKGCVS LESNFLQLNP EKIGELVFNS PDKADWFYWN 60 YGRQNGFDVR RCHKKTVNDS LVKNVEWVCS RVGFRQPLKY EAKCKRRPRE ETRCGCEARF 120 RVAHDQHDGL YKVTEFVLFH NHALETSEIA HRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28530.1 | 6e-12 | FAR1 family protein |