PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN09374.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TCP

Protein Properties

Length: 282aa MW: 29728 Da PI: 9.8085

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN09374.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	121.8	7.8e-38	40	152	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssg.......... 88 ++kk + +++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++a+++ +++s ++s+s ss++ PIN09374.1 40 PVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPATFStvSPSSARNSSS-SSISaaldhkplsh 137 579*************************************************************99999666554444444444.22324565566666 PP TCP 89 ..............k 89 + PIN09374.1 138 slltptpfilgkrlR 152 666554444444431 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MSTSATEGAN GGGGPIVDPS QRHHQLQSPS TNNTNNAALP VKKPPAKDRH SKVDGRGRRI 60 RMPIICAARV FQLTRELGHK SDGQTIEWLL RQAEPSIIAA TGTGTTPATF STVSPSSARN 120 SSSSSISAAL DHKPLSHSLL TPTPFILGKR LRPDDDDHHQ HLSKDDVTSA SASMGPTVAA 180 GGFWALPARP DFGQVWSFAA PPPEMVVAAA AASNNSQQQQ PHSASLRFLQ QQQPLGIGEA 240 SAARVGNYLP IAQVQGHHLN LLASLSGPPP QSSEQQRDGD AN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	1e-60	TCP family protein