PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN09344.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NF-YC | ||||||||
Protein Properties | Length: 136aa MW: 15733.2 Da PI: 9.973 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 43.7 | 6e-14 | 16 | 97 | 17 | 97 |
NF-YC 17 knhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrt.difdflvdivp 97 ++ e+P r+kki+k d+d++++ +ea l++ + elf+ l+ +s a e+k+rt++ + a +r + dfl+d p PIN09344.1 16 HKLEIPTRRVKKIMKLDKDINKVNSEALFLVASSTELFLQFLAEKSADVAMEKKKRTIRIEHLRLAAKRHrPTADFLLDCLP 97 45689**********************************************************98887761689*****987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 136 aa Download sequence |
MADQEEENPN AIEEPHKLEI PTRRVKKIMK LDKDINKVNS EALFLVASST ELFLQFLAEK 60 SADVAMEKKK RTIRIEHLRL AAKRHRPTAD FLLDCLPVPP QPSEQNPPKD RAKSRPDKKR 120 VPFETRSIDA FFQKCT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43250.1 | 5e-37 | NF-YC family protein |