PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN09325.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 735aa MW: 84744.5 Da PI: 7.1093

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN09325.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	84.2	2.2e-26	30	116	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Y+eYAk+vGF + k +s++s+ ++e+++++f C ++g++++++++ ++r++ ++gCka+++vk++ +gkw+++++++eHnHel p PIN09325.1 30 EYYKEYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDA----INPRPSPKIGCKASMHVKRRPNGKWYIHSFVKEHNHELLP 116 69*************************************999877....9**********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 735 aa Download sequence
MEASSSSMVA NSDLEPRDEM EFDTHEAAYE YYKEYAKSVG FGTAKLSSRR SRASKEFIDA 60 KFSCIRYGNK QQSDDAINPR PSPKIGCKAS MHVKRRPNGK WYIHSFVKEH NHELLPAQVH 120 FFRSHRNADS VNNDAKVRKK KVMASVMKQY GAYQFSGSCI ENVIRNQHDR GRFLGLEEGG 180 AQAVLEFCAN MHEENPKFFY ALDFNEEHQL RNVLWVDAKG VEDFTYFGDV VSFDTTYFAS 240 KYRIPLVLFI GVNHHIQPTL LGCGLVAVET LYTFVWLMQS WCLAMGGRTP KVLLTDQNEA 300 IKAAVPLVFP DTRHFFNLWN VLEKIPRRLD YLSIWHDTFM GKLNKCIYKS WKEEQFEKRW 360 WKLIERFNLQ EDEWIQALYE DRKLWVPAFM KEVSFAGLCA ASRSESLNCF FDRYIHSETS 420 LRDLIGQYKS VLEDRYEEEA KANFDAWHET PDLKSPSPFE KQMLLVYTHE IFKKFQMEEK 480 EEGSTVFYGV KDFENNQDFV VEWNEQKSDI YCSCHSFQYK GYLCRHAIVV LQMSGVFSIP 540 FKYILQRWTN AATSRTPLSE KLDEVQAKVR RYNDLCRRAI ILGEEGSLSQ ESYITAVGAI 600 NEALKQCLDV TKPPENDLRP EISAPLAIQG VPAANHDVSI TSVQLLPMSK MTNMNKGSKR 660 KEPASHGGIT SKKGKVPLEP QIANMGNQGI FQHMDMPGHM DYPALYPRFL TTLLKGGDMS 720 KRSVEMLGEM LEEQS

Sequence ? help Back to Top

Protein Sequence Length: 735 aa Download sequence

MEASSSSMVA NSDLEPRDEM EFDTHEAAYE YYKEYAKSVG FGTAKLSSRR SRASKEFIDA  60
KFSCIRYGNK QQSDDAINPR PSPKIGCKAS MHVKRRPNGK WYIHSFVKEH NHELLPAQVH  120
FFRSHRNADS VNNDAKVRKK KVMASVMKQY GAYQFSGSCI ENVIRNQHDR GRFLGLEEGG  180
AQAVLEFCAN MHEENPKFFY ALDFNEEHQL RNVLWVDAKG VEDFTYFGDV VSFDTTYFAS  240
KYRIPLVLFI GVNHHIQPTL LGCGLVAVET LYTFVWLMQS WCLAMGGRTP KVLLTDQNEA  300
IKAAVPLVFP DTRHFFNLWN VLEKIPRRLD YLSIWHDTFM GKLNKCIYKS WKEEQFEKRW  360
WKLIERFNLQ EDEWIQALYE DRKLWVPAFM KEVSFAGLCA ASRSESLNCF FDRYIHSETS  420
LRDLIGQYKS VLEDRYEEEA KANFDAWHET PDLKSPSPFE KQMLLVYTHE IFKKFQMEEK  480
EEGSTVFYGV KDFENNQDFV VEWNEQKSDI YCSCHSFQYK GYLCRHAIVV LQMSGVFSIP  540
FKYILQRWTN AATSRTPLSE KLDEVQAKVR RYNDLCRRAI ILGEEGSLSQ ESYITAVGAI  600
NEALKQCLDV TKPPENDLRP EISAPLAIQG VPAANHDVSI TSVQLLPMSK MTNMNKGSKR  660
KEPASHGGIT SKKGKVPLEP QIANMGNQGI FQHMDMPGHM DYPALYPRFL TTLLKGGDMS  720
KRSVEMLGEM LEEQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.1	0.0	FAR1 family protein