PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN09285.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 680aa MW: 78155 Da PI: 7.9885

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN09285.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.4	3.5e-21	62	155	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+++Ak++GFs+r+++++ + + t+r fvC + g++ ++++++k +r+r+++r+gC+a ++++k++ +w+vt + ++HnHel PIN09285.1 62 EFYSDFAKRCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPVKTSNENKPQRNRKSSRCGCQAYMRISKSTelgVPEWRVTGFANHHNHELL 155 6************9998877356667999***********999******************99777789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 680 aa Download sequence
MSEEAGHMML VYDDPSDQRS ISLDDMSSTE ESPDETRLSL ETTNDAIPYI GQRFATHDAA 60 YEFYSDFAKR CGFSIRRHRT EGKDGVGKGL TRRYFVCHRA GNTPVKTSNE NKPQRNRKSS 120 RCGCQAYMRI SKSTELGVPE WRVTGFANHH NHELLEPNQV RFLPAYRTIS ESDKNRILMF 180 AKTGISVQQM MRLLELEKCV EPGYLPFTEK DVRNLLQSFR KVDPEDESID LLRMCRNIKD 240 KDPNFKFEFT LDSNGRLENI AWSYASSIQS YEIFGDAVVF DTTHRLTAFD MPLGIWVGMN 300 NYGMPCFFGC VLLREENLRS FSWALKAFSG FMNGKAPQTI LTDQNMCLKE AIGMEMPTTK 360 HALCIWLIVA KFPSWFNAVL GERYNEWKAE FYRLYNLETI EDFELGWRDM VNSFGLHTNR 420 HIASLYALRT LWALPYLRSH FFAGMTAPGQ SKSINAFIQR FLSAQTRLAH FVEQVAVAVD 480 FKDQAGEQQT MQQNIQNISL KTGAPMESHA ASVLTPYAFS KLQEQLVMAA HYASYQMEDG 540 FLVRHHTKLE GGRKVYWVPR EGIISCSCHQ FEFSGILCRH ALRVLSTGNC FQIPERYLLL 600 RWRRISTPPN RHLQAPRNDH TERIQLLQTM VSTLVTESAK SKERLDLATE QVSILLSQIR 660 EQPVSSLGLR ELSSTHRNLT

Sequence ? help Back to Top

Protein Sequence Length: 680 aa Download sequence

MSEEAGHMML VYDDPSDQRS ISLDDMSSTE ESPDETRLSL ETTNDAIPYI GQRFATHDAA  60
YEFYSDFAKR CGFSIRRHRT EGKDGVGKGL TRRYFVCHRA GNTPVKTSNE NKPQRNRKSS  120
RCGCQAYMRI SKSTELGVPE WRVTGFANHH NHELLEPNQV RFLPAYRTIS ESDKNRILMF  180
AKTGISVQQM MRLLELEKCV EPGYLPFTEK DVRNLLQSFR KVDPEDESID LLRMCRNIKD  240
KDPNFKFEFT LDSNGRLENI AWSYASSIQS YEIFGDAVVF DTTHRLTAFD MPLGIWVGMN  300
NYGMPCFFGC VLLREENLRS FSWALKAFSG FMNGKAPQTI LTDQNMCLKE AIGMEMPTTK  360
HALCIWLIVA KFPSWFNAVL GERYNEWKAE FYRLYNLETI EDFELGWRDM VNSFGLHTNR  420
HIASLYALRT LWALPYLRSH FFAGMTAPGQ SKSINAFIQR FLSAQTRLAH FVEQVAVAVD  480
FKDQAGEQQT MQQNIQNISL KTGAPMESHA ASVLTPYAFS KLQEQLVMAA HYASYQMEDG  540
FLVRHHTKLE GGRKVYWVPR EGIISCSCHQ FEFSGILCRH ALRVLSTGNC FQIPERYLLL  600
RWRRISTPPN RHLQAPRNDH TERIQLLQTM VSTLVTESAK SKERLDLATE QVSILLSQIR  660
EQPVSSLGLR ELSSTHRNLT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein