PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN09158.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

ARF

Protein Properties

Length: 684aa MW: 76118.1 Da PI: 7.1999

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN09158.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74	1.7e-23	124	225	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ +++ + t+ +d +g+ W++++iyr++++r++lt+GW++Fv++++L +gD++vF + +++ l PIN09158.1 124 FAKTLTQSDANNGGGFSVPRYCAETIfprldysAEPPVQ--TILAKDVHGEIWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFL--RAENGDL 218 89**************************986445444..8999*****************************************..4488999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+++r+ PIN09158.1 219 CVGIRRA 225 **997 PP
2	Auxin_resp	116.9	1.8e-38	286	369	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++++FevvY+Prast+eFvv+ + v++a++v++++GmRfkm fetedss++++ +Gt+++v+ dpv+WpnS+Wr+L+ PIN09158.1 286 AANLAANGQPFEVVYYPRASTPEFVVRQSAVRAAMRVQWCPGMRFKMPFETEDSSRISWfMGTISSVQVDDPVHWPNSPWRLLQ 369 7899******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 684 aa Download sequence
MINVMHSVTK PMNQVEKSLD PQLWHACAGG MAQIPPGNSK VYYFPQGHAE HANKNVDFSR 60 FPRIPPLIPC KVSSIKYLAD TETDEVYAKI RLVPLRGNEL DVNDDENGFL GFDKNEEKEK 120 TNSFAKTLTQ SDANNGGGFS VPRYCAETIF PRLDYSAEPP VQTILAKDVH GEIWKFRHIY 180 RGTPRRHLLT TGWSNFVNQK KLVAGDSIVF LRAENGDLCV GIRRAKRGIG GGPEVSCGWN 240 TGAASLYRGF SSFSSFLGEN GKKGSGNCEL GLREKGNVSG ESVLEAANLA ANGQPFEVVY 300 YPRASTPEFV VRQSAVRAAM RVQWCPGMRF KMPFETEDSS RISWFMGTIS SVQVDDPVHW 360 PNSPWRLLQV AWDEPDLLQN VKRVSPWLVE LVSNMPQIHH VAFSPPRKRP RIPYPSEFPI 420 EQLPLPKLLN NPISPSSPLC CLHDNISMGL QGARHAQFEL SSSDLQFKKL QAGLQPFDFK 480 LLDYSSQIPK FLTGHPLENR KYDAFSWSLK TGNSTEELKK ENNAKNAKLV LFGQPILTAE 540 QISQTYSTDT EGNSLSDGNH MANVSNGSGS AVIQNFPPEA SSDGEFPRFK DQKLDLGTGH 600 CKVFMESEDV GRTLELKILG SYDELYKKLA AIFGMERSEM SSNVLYTDAE GTTKQMGDEP 660 FSDFIKKARR LTILTDSGSV NLGN

Sequence ? help Back to Top

Protein Sequence Length: 684 aa Download sequence

MINVMHSVTK PMNQVEKSLD PQLWHACAGG MAQIPPGNSK VYYFPQGHAE HANKNVDFSR  60
FPRIPPLIPC KVSSIKYLAD TETDEVYAKI RLVPLRGNEL DVNDDENGFL GFDKNEEKEK  120
TNSFAKTLTQ SDANNGGGFS VPRYCAETIF PRLDYSAEPP VQTILAKDVH GEIWKFRHIY  180
RGTPRRHLLT TGWSNFVNQK KLVAGDSIVF LRAENGDLCV GIRRAKRGIG GGPEVSCGWN  240
TGAASLYRGF SSFSSFLGEN GKKGSGNCEL GLREKGNVSG ESVLEAANLA ANGQPFEVVY  300
YPRASTPEFV VRQSAVRAAM RVQWCPGMRF KMPFETEDSS RISWFMGTIS SVQVDDPVHW  360
PNSPWRLLQV AWDEPDLLQN VKRVSPWLVE LVSNMPQIHH VAFSPPRKRP RIPYPSEFPI  420
EQLPLPKLLN NPISPSSPLC CLHDNISMGL QGARHAQFEL SSSDLQFKKL QAGLQPFDFK  480
LLDYSSQIPK FLTGHPLENR KYDAFSWSLK TGNSTEELKK ENNAKNAKLV LFGQPILTAE  540
QISQTYSTDT EGNSLSDGNH MANVSNGSGS AVIQNFPPEA SSDGEFPRFK DQKLDLGTGH  600
CKVFMESEDV GRTLELKILG SYDELYKKLA AIFGMERSEM SSNVLYTDAE GTTKQMGDEP  660
FSDFIKKARR LTILTDSGSV NLGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein