PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN09018.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

GeBP

Protein Properties

Length: 363aa MW: 41799.6 Da PI: 7.0435

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN09018.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	72.5	8.2e-23	107	198	4	97
DUF573 4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiWg 97 ++++s+eDe++lL Gl f a+ gk + +++f++f+k++++ ++++ q++eKir+LK+Kf ++ kk +++g + +fs +h++ if+lsk++W+ PIN09018.1 107 SKIFSDEDEVALLEGLAAFWAN-GK--NNKWTEFHQFIKNNLQHEFTRIQVSEKIRSLKRKFDTNLKKyKSNGGKLDFSDPHESVIFNLSKQLWD 198 589**************655.53..468*********************************97778999*****************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MAPKKLIFSK QEEEEKRTNE GTQSKTSSES DSSDSDSQEN RAVSVLAPLK PMFYQEAPTS 60 VPDPEPEPEP ETESESGDGS DCSSPSASGF MIMPSVKPAE KKKSSDSKIF SDEDEVALLE 120 GLAAFWANGK NNKWTEFHQF IKNNLQHEFT RIQVSEKIRS LKRKFDTNLK KYKSNGGKLD 180 FSDPHESVIF NLSKQLWDDE GGLVDGSNHD DEEKKRAPHQ NPRKRAGSEH EGGKRKKKKV 240 TDGTEHEQEK RKPKRVVDET EYKEDKRKKK RAVDETDHGE EKRNKKPVAK EIEKKDFGSE 300 YPFLWASLQG FPSVTRENIH LIGREKAEKL EENWRKLYAD ELQLKLKRME LMRRDLERQV 360 MNS

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MAPKKLIFSK QEEEEKRTNE GTQSKTSSES DSSDSDSQEN RAVSVLAPLK PMFYQEAPTS  60
VPDPEPEPEP ETESESGDGS DCSSPSASGF MIMPSVKPAE KKKSSDSKIF SDEDEVALLE  120
GLAAFWANGK NNKWTEFHQF IKNNLQHEFT RIQVSEKIRS LKRKFDTNLK KYKSNGGKLD  180
FSDPHESVIF NLSKQLWDDE GGLVDGSNHD DEEKKRAPHQ NPRKRAGSEH EGGKRKKKKV  240
TDGTEHEQEK RKPKRVVDET EYKEDKRKKK RAVDETDHGE EKRNKKPVAK EIEKKDFGSE  300
YPFLWASLQG FPSVTRENIH LIGREKAEKL EENWRKLYAD ELQLKLKRME LMRRDLERQV  360
MNS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	223	239	RKRAGSEHEGGKRKKKK
2	250	266	RKRAGSEHEGGKRKKKK
3	266	290	KRKKKRAVDETDHGEEKRNKKPVAK
4	268	292	KRKKKRAVDETDHGEEKRNKKPVAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	2e-09	GeBP family protein