PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN08910.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WOX
Protein Properties Length: 253aa    MW: 28434.6 Da    PI: 8.4187
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN08910.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.14.1e-202687257
                T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                ++R+t+t+eq+++L++l+++   r p+a++++++++kl    +++ ++V++WFqN++a+e++
  PIN08910.1 26 STRWTPTTEQIRILKDLYYNngVRSPTADQIQRISAKLrqygKIEGKNVFYWFQNHKARERQ 87
                58*****************8678*************************************97 PP
2Wus_type_Homeobox115.82.1e-372589265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       ++tRWtPt+eQi+iL++ly+ +G+r+P++++iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+
         PIN08910.1 25 SSTRWTPTTEQIRILKDLYYnNGVRSPTADQIQRISAKLRQYGKIEGKNVFYWFQNHKARERQKK 89
                       789***************9779*****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MEPQQAANEE GSCSGKNTSF LCRQSSTRWT PTTEQIRILK DLYYNNGVRS PTADQIQRIS  60
AKLRQYGKIE GKNVFYWFQN HKARERQKKR FTADIPMHRP QIYNKFSNNI NTPQPGNNFP  120
SSSSTSPAGL LTVGNYGYAS VAMEKSFGEC SITPSGSMGQ NFAWIGVDPY TSSYPFVEKR  180
KYATEQTLEM EEEEDASASA LPEIETLPLF PMHGDIKQET GWRRRADDSI SAGPRASLEL  240
SLTSYAARFP NSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.13e-49WOX family protein