PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN08902.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 277aa    MW: 31047.7 Da    PI: 6.7247
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN08902.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.43.4e-102977254
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                ++ +  rE+ RRd++N+ f+eL  ll +      +K++Ka++L+ +++ +k+L
  PIN08902.1 29 KVLKADREKLRRDKLNEQFQELGNLLDPG----RPKNDKASVLTDTIQVLKDL 77
                566789*******************9884....59***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MDRLKTDEDS LESRQINDVE VNDAVTSRKV LKADREKLRR DKLNEQFQEL GNLLDPGRPK  60
NDKASVLTDT IQVLKDLNSE VTKLKAEHAV LCEESCELTQ EKNELRQEKV SLKSDINGLK  120
AQHHQSQRFM VPWMAQPYPF PVGLPVHQMI QPLPFLANHH TATPNPNSTF IPYLAPIIHR  180
LDQPNTLNAS SSYISGPENS TERSSHNKRV DNSNEVATDL ELKAPGATAI KELPPRERGK  240
QIAGQQQETK SVKNESCSSK SSSQVSQSRA SNNIDDV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.11e-54bHLH family protein