PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN08852.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 284aa MW: 31611.9 Da PI: 9.5865

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN08852.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.6	2.4e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++ +G g+W++ ++ g+ R++k+c++rw +yl PIN08852.1 14 KGAWTKEEDQRLISYIRAHGEGNWRSLPKAAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	55.1	1.8e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eE e++++++ +lG++ W++Ia +++ gRt++++k++w+++ PIN08852.1 67 RGNFTEEEVEIIIKLHSLLGNK-WSLIAGRLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 284 aa Download sequence
MGRSPCCEKA HTNKGAWTKE EDQRLISYIR AHGEGNWRSL PKAAGLLRCG KSCRLRWINY 60 LRPDLKRGNF TEEEVEIIIK LHSLLGNKWS LIAGRLPGRT DNEIKNYWNT HIKRKLISSG 120 IDPQTQRPLN SATVAASSPN TCLDFRNSTH PPSMEKPTKN ICVRATNNSS SIEDNKCNSG 180 TTEESHPPPL RPPPPQQKQQ QQQEKAGLPL DLELSIGLPF QSKNTKTSSF NSPLLADQFK 240 SFHKFSQPPS AAAETPPKAA TVVGHAMCMC WQLGPHNCQL IGNC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09460.1	2e-87	MYB family protein