PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN08820.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 876aa MW: 100499 Da PI: 8.6174

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN08820.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70.7	3.4e-22	86	174	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHn.Hela 90 kfYn+YA+e GFs+rk++ +k +g+i++rtf+C ++g+r+++k++ ++ +++r+etr gC a++++ ++++k+++ +++ eHn H+l+ PIN08820.1 86 KFYNDYARENGFSIRKHTIHKD-IKGRIIDRTFCCACQGHRQKDKRD-VTYKSHRPETRKGCCAMMRIDSRNSSKYKIVSFVAEHNgHDLV 174 6*************999988.8888*************999.999*********************************78776 PP

Sequence ? help Back to Top
Protein Sequence Length: 876 aa Download sequence
MLSIGEDSTL LATNLLAVSE EMDIDNSNNF TPRRKLEFFV DLNKEEEDVL DNCSGENLII 60 ENRRIILEEK IPKIGMEFDT EEAAYKFYND YARENGFSIR KHTIHKDIKG RIIDRTFCCA 120 CQGHRQKDKR DVTYKSHRPE TRKGCCAMMR IDSRNSSKYK IVSFVAEHNG HDLVSPSKTH 180 MLRSHRAITI AQSLQADDID GSGIAPRAGF ALMAKQVGGR ENIGFIYEDY KNYLRSKRTV 240 QMRIGDTGGV LEYLQQRQLD DPNFFYAIQV DEDDLIANII WADAQMMADY THFGDVVCFD 300 TTYRKNKEGR PFALFVGVNH HKQTIVFGAA LLYDETAATF MWLFDTFARA MSGKQPKTIL 360 TDQDAAMAKA LAIKWPETCH RLCIWHIYQN AAIHLSNIFS HFASFSKDFS SCIYDYDEEE 420 EFLNAWHQML EKYGLQTNDW MQRMFKIREK WALVYGRQTF CADLMTTQRS ESMNSMLKKY 480 VSYKHNLLQF FHHFDRLIED RRYQELKADL RTSQSTPVAS FPVEILKHAA SVYTHEVFEL 540 FQDEVRKAYD SPVEFCGESG DVFEYKVTPF RKQYEHTIVY HSLEGKVSCS CKKFEFAGIL 600 CSHALKVLSL QNVVKIPDLY IKKRWTKKAK KNVVEAESSK LGVCPTESMN ETEEKKMIGV 660 HFKELRSLTN QLVTRGALTV ESFKIAKMGL LKMIEEVEAS LENKVVVKPT LGPKSIVKKH 720 LFSRAVAKGV SSSEVCEKQI ITLDEDENAP DEIIIKGWKN KEKKPKSGKR PKSGLEKSIR 780 RKKQKSENVF SLNNGSSDAR DKQEYQVGGY NLSMVHPTQG SSLSNVEPLR HAQPNPIPSD 840 LAAALIACLA LVLAKNSKPY RSRSRNYHSR FIKMTS

Sequence ? help Back to Top

Protein Sequence Length: 876 aa Download sequence

MLSIGEDSTL LATNLLAVSE EMDIDNSNNF TPRRKLEFFV DLNKEEEDVL DNCSGENLII  60
ENRRIILEEK IPKIGMEFDT EEAAYKFYND YARENGFSIR KHTIHKDIKG RIIDRTFCCA  120
CQGHRQKDKR DVTYKSHRPE TRKGCCAMMR IDSRNSSKYK IVSFVAEHNG HDLVSPSKTH  180
MLRSHRAITI AQSLQADDID GSGIAPRAGF ALMAKQVGGR ENIGFIYEDY KNYLRSKRTV  240
QMRIGDTGGV LEYLQQRQLD DPNFFYAIQV DEDDLIANII WADAQMMADY THFGDVVCFD  300
TTYRKNKEGR PFALFVGVNH HKQTIVFGAA LLYDETAATF MWLFDTFARA MSGKQPKTIL  360
TDQDAAMAKA LAIKWPETCH RLCIWHIYQN AAIHLSNIFS HFASFSKDFS SCIYDYDEEE  420
EFLNAWHQML EKYGLQTNDW MQRMFKIREK WALVYGRQTF CADLMTTQRS ESMNSMLKKY  480
VSYKHNLLQF FHHFDRLIED RRYQELKADL RTSQSTPVAS FPVEILKHAA SVYTHEVFEL  540
FQDEVRKAYD SPVEFCGESG DVFEYKVTPF RKQYEHTIVY HSLEGKVSCS CKKFEFAGIL  600
CSHALKVLSL QNVVKIPDLY IKKRWTKKAK KNVVEAESSK LGVCPTESMN ETEEKKMIGV  660
HFKELRSLTN QLVTRGALTV ESFKIAKMGL LKMIEEVEAS LENKVVVKPT LGPKSIVKKH  720
LFSRAVAKGV SSSEVCEKQI ITLDEDENAP DEIIIKGWKN KEKKPKSGKR PKSGLEKSIR  780
RKKQKSENVF SLNNGSSDAR DKQEYQVGGY NLSMVHPTQG SSLSNVEPLR HAQPNPIPSD  840
LAAALIACLA LVLAKNSKPY RSRSRNYHSR FIKMTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-143	FAR1 family protein