PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN08784.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Trihelix

Protein Properties

Length: 298aa MW: 33647.2 Da PI: 8.4521

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN08784.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	38.7	2.7e-12	24	114	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +Wt++ + +L++a ++ +l+rg ++ +W++v++++ e+ f + qCk++++ l+k+yk +k ++ + + +s++p+f++le PIN08784.1 24 CWTEEATFTLVDAWGRRYLELNRGYFRQRDWQQVADVVnarqghTEKTF-HTDAQCKNRIDALKKKYKVEKGKISQSNGTLTSSWPFFSRLE 114 8***********************************88655333333.36789**********999999888888899***997 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MGDLMASPAP QPPPSRQVSH REDCWTEEAT FTLVDAWGRR YLELNRGYFR QRDWQQVADV 60 VNARQGHTEK TFHTDAQCKN RIDALKKKYK VEKGKISQSN GTLTSSWPFF SRLEPLIESN 120 LNQHQNKLTL SATPLQSSQS MMLLSQPSPP ASVPLPCRKL PASSMVTPLI LPQKRLASST 180 DVDESFRRNY SIAAAAAAAS AEDDANMDED DGELEGEEVK GSKDRTVKEE KKRKEGMGNL 240 AHAIQRFGEI YEKVESMKLK QMVELEKQRM QFAKDLTVQG MQLFMDTAAQ LEKLKQAK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	231	260	KKRKEGMGNLAHAIQRFGEIYEKVESMKLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	2e-53	Trihelix family protein