PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN08774.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 313aa    MW: 34062.3 Da    PI: 4.8519
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN08774.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.32.9e-1396147155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +r++h  +Er+RR+++N+ ++ Lr+l+P     + k+ + a+i   +v+YI +Lq
  PIN08774.1  96 QRMSHITVERNRRKQMNENLSVLRSLMPCF---YVKRGDQASIIGGVVDYITELQ 147
                 79***************************9...9*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MESEGLSDFF EDSAFSSAAA SPDDIFSVLE AWESASGEEK NGSFEFQKSA YSPLSGAFQE  60
SETELEAASP RCKRQKMTSA STAAASASQI MEDGQQRMSH ITVERNRRKQ MNENLSVLRS  120
LMPCFYVKRG DQASIIGGVV DYITELQQVL QSLEAKKQRK AYSEVLSPRV ISSPRPSALS  180
PRKPPLSPRL SLPISPSTPQ PSSPYRSWMH QSGFLNSPSL PSPVEPSPCN SSTSSINDAV  240
NELVASSKST VAEVEVKFSG PNLLLKTVSH QIPGQAIKII SALEELALEI LQIGIECQLS  300
AEELAQQIQQ TFC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
197108RMSHITVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53210.13e-42bHLH family protein