PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN08676.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 290aa    MW: 33203 Da    PI: 9.5093
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN08676.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.43e-1419961394
                TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94
                s+rl +   f++ ++++   + +  l++++g+ W+v++  +k +++ ++++GW +F ++ng++ gD +vF+++g+  f l++
  PIN08676.1 19 SNRLQIHPAFTSFMKSS--LPNKALLKNSHGELWSVEV--TKVGDESYFEEGWVKFIQENGIEFGDLLVFHYNGDCVFDLKI 96
                67899999999666544..8889***************..99999999*************************999885554 PP
2B346.28e-15189265787
                 .-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
          B3   7 psdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                 +   +++g l +p + + ++g+k   ++ +tl+d++g  W +k++ +k  gr++l+ GW++ +k n+L++gD++v + ++ 
  PIN08676.1 189 TIRENRNGSLHVPTEIIHDNGIK--FHRVVTLRDPDGHAWHLKVSQWKD-GRFWLQ-GWNQLCKRNHLRVGDVCVCEIVQG 265
                 5567788999*******999988..6779***************88887.5899*9.******************997643 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MEPPKKYPAF MKPFFSACSN RLQIHPAFTS FMKSSLPNKA LLKNSHGELW SVEVTKVGDE  60
SYFEEGWVKF IQENGIEFGD LLVFHYNGDC VFDLKILGKM ASKKEILEAF DFDLRDFVRD  120
KKKERDEMLK KRTLKRKHGA CGVGSSEFKK DDDVALGAQA SDARKTDNVE DVSPLKTGYM  180
NGNPYFVTTI RENRNGSLHV PTEIIHDNGI KFHRVVTLRD PDGHAWHLKV SQWKDGRFWL  240
QGWNQLCKRN HLRVGDVCVC EIVQGRGRVG TYIQVHVRKA LSNSLQVKSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53310.16e-27B3 family protein