PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN08490.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 472aa MW: 50439 Da PI: 8.2471

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN08490.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	48.8	1.2e-15	298	343	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ Er+RRd+iN+++ +L++l+P++ K +Ka++L +++eY+k+Lq PIN08490.1 298 HNQSERKRRDKINQRMKTLQKLVPNS-----SKTDKASMLDEVIEYLKQLQ 343 9**********************8.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence
MSQCVPSWDL DDSSAMPKLN FRANSNSSNS LPPDVPSLDY EVAELTWKNG QLAMNGLGPP 60 RVVNKPTGKS SPTKYTSWDK PRAGGTLESI VNQATKHPNP KSAVYGGTDG VYELVPWFDH 120 HRAMVNPNAS PCVTMTMDAL VPCNTNQENS THVLESVPGA GTCVVGCSTR VGSCSGSAAG 180 ADGGVTGGRV ARGGTCSCKT NGSVSESATC GGRDSRQVTL DTCDMELGGG AGLTSKSSSL 240 WSQENTSSGK EYTRTSGEDH DSVCHSRSQR ETGEEEGKRK SNGKSSVCTK RSRAAAIHNQ 300 SERKRRDKIN QRMKTLQKLV PNSSKTDKAS MLDEVIEYLK QLQAQVQMMS RMNMPSMMLP 360 LAFQQQLQMS MMAHPAAMAM GMGVMDINAI GRAAAALPPV LPPAAAFMPM PTWDMQGDRL 420 QPPPPPPIMP DLLSAFLACQ PQSQPMGVDA YSRLAALYQQ FQQTPAASAS KN

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence

MSQCVPSWDL DDSSAMPKLN FRANSNSSNS LPPDVPSLDY EVAELTWKNG QLAMNGLGPP  60
RVVNKPTGKS SPTKYTSWDK PRAGGTLESI VNQATKHPNP KSAVYGGTDG VYELVPWFDH  120
HRAMVNPNAS PCVTMTMDAL VPCNTNQENS THVLESVPGA GTCVVGCSTR VGSCSGSAAG  180
ADGGVTGGRV ARGGTCSCKT NGSVSESATC GGRDSRQVTL DTCDMELGGG AGLTSKSSSL  240
WSQENTSSGK EYTRTSGEDH DSVCHSRSQR ETGEEEGKRK SNGKSSVCTK RSRAAAIHNQ  300
SERKRRDKIN QRMKTLQKLV PNSSKTDKAS MLDEVIEYLK QLQAQVQMMS RMNMPSMMLP  360
LAFQQQLQMS MMAHPAAMAM GMGVMDINAI GRAAAALPPV LPPAAAFMPM PTWDMQGDRL  420
QPPPPPPIMP DLLSAFLACQ PQSQPMGVDA YSRLAALYQQ FQQTPAASAS KN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	302	307	ERKRRD
2	303	308	RKRRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	8e-83	bHLH family protein