PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN08489.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 267aa    MW: 28803.8 Da    PI: 7.0547
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN08489.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.7e-1999147355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GVr+++ +g+Wv+eIr+p++   + r++lg++ tae+Aa+a++ a+++++g
  PIN08489.1  99 YRGVRRRS-WGKWVCEIREPRK---KSRIWLGTYPTAEMAARAHDVAALAIKG 147
                 9****887.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MEHEITVRTL LQDHIPSSPS SSTIAPTAAA TTSSTSCGGS SSASATPTSS STISSPSNKF  60
SKEKKSTKKA QGHKSGNEDT KPRRGTASTA ASDEKHPMYR GVRRRSWGKW VCEIREPRKK  120
SRIWLGTYPT AEMAARAHDV AALAIKGQSA YLNFPHLAHE LPRPASTAPK DIQAAATKAA  180
ACTFLDAEVE PSLPNSHSST NVALDNVQES SNSASTAHDD DTFFDLPDLS LDSMDHRDGY  240
CYLASSWQLA GADIGFRLED PFLWECF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.12e-59ERF family protein