PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN08457.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HSF

Protein Properties

Length: 482aa MW: 53385 Da PI: 5.2675

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN08457.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	108.1	6.8e-34	20	110	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k+ye+++d++++ ++sws +sfvv+++ efa+ +Lp+yFkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F k++k+ll++i+ PIN08457.1 20 FLLKTYEMVDDSTTDAIVSWSGGRKSFVVWNPPEFARVLLPSYFKHNNFSSFIRQLNTYGFRKIDPEK---------WEFANEDFVKDQKHLLKNIH 107 9******************999*************************************999.........****************** PP XXX CS HSF_DNA-bind 99 rkk 101 r+k PIN08457.1 108 RRK 110 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MDGGAAGGNA SGGGGGPAPF LLKTYEMVDD STTDAIVSWS GGRKSFVVWN PPEFARVLLP 60 SYFKHNNFSS FIRQLNTYGF RKIDPEKWEF ANEDFVKDQK HLLKNIHRRK PIHSHSQPQG 120 SVDSERAAFE EEIDKLSREK TALEGTVSGF KEQQSAAKLQ LENLTERISG MEQRQEKLLS 180 FLEKAIQNPE FVERLAQKLE SMDFSAYNKK RRLPQADNVQ LTQDNVLVDN QSSSRSEFGS 240 ICHQDFCNKL TLELSPAVSD VNLLSHSTQS SNEDGISPQG RIDGWSKDVH VRTAGFLCPP 300 ETLELSDTGA SFNLKMDSSL SCKMGPESPK QHSLHSNDEG DGHLSCLLNL SLASSPLELN 360 KSQNSVAMPL SSQDICTASR LNNESNEASH RAPSKDSALS DDAQALSSSP DGHNNKQGPA 420 TEQKRVNDVF WEQFLTERPG CLDTEEASSS FRANHYDEQE ERKSVKGIAT NTKVSWKGLL 480 ED

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MDGGAAGGNA SGGGGGPAPF LLKTYEMVDD STTDAIVSWS GGRKSFVVWN PPEFARVLLP  60
SYFKHNNFSS FIRQLNTYGF RKIDPEKWEF ANEDFVKDQK HLLKNIHRRK PIHSHSQPQG  120
SVDSERAAFE EEIDKLSREK TALEGTVSGF KEQQSAAKLQ LENLTERISG MEQRQEKLLS  180
FLEKAIQNPE FVERLAQKLE SMDFSAYNKK RRLPQADNVQ LTQDNVLVDN QSSSRSEFGS  240
ICHQDFCNKL TLELSPAVSD VNLLSHSTQS SNEDGISPQG RIDGWSKDVH VRTAGFLCPP  300
ETLELSDTGA SFNLKMDSSL SCKMGPESPK QHSLHSNDEG DGHLSCLLNL SLASSPLELN  360
KSQNSVAMPL SSQDICTASR LNNESNEASH RAPSKDSALS DDAQALSSSP DGHNNKQGPA  420
TEQKRVNDVF WEQFLTERPG CLDTEEASSS FRANHYDEQE ERKSVKGIAT NTKVSWKGLL  480
ED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-138	HSF family protein