PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN08336.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 484aa MW: 56874.7 Da PI: 8.5785

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN08336.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	25.3	5e-08	106	137	58	89
FAR1 58 trtgCkaklkvkkekdgkwevtkleleHnHel 89 +t+Cka+ ++ +ek+++w+vt+++ eHnHe+ PIN08336.1 106 IKTKCKARPRIGQEKEEEWKVTRFVMEHNHEI 137 69****************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MEENLSIPPQ ANEANNFCEF TEQSIFTESY LPKPREVQSI SSIIDELDSR LVVGQVVKSV 60 EDAYFLYCDY AHAKGFSIRK GDQPYFPCSN ELQAKEFECS CGGPTIKTKC KARPRIGQEK 120 EEEWKVTRFV MEHNHEIGEV DQTYLLRSSR NLSNAQKSTL EAMVNAGIYV ASAVSYMEEK 180 AHGPENLRFT RKDAYDYIRS LKKHRKSNNE PYFYWDAQLD DDNRVMNFFF RDYRCRIDYE 240 SFGDVLSVDT TYRTNRYNLI MCSFCGLWQW HINQSAPSHL EKLNCDSRLK QLWNKCRTYC 300 DSKEEFEETD HKWLNGMYKL RHNWATTFSN TRFSARLLAT SRSEGTNSML KKANNRTISL 360 YDFFVEDPSF VGPFFILFKV KSLNQYSRIR NVWLNKQKNV VKCSCYKFDS MGILCKHALK 420 VLNHVKVHSL PKQYIKKRWM KSMRNRDARS MLTKILHNTQ EKTIVLLENL SLNYLHACDD 480 VVVD

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MEENLSIPPQ ANEANNFCEF TEQSIFTESY LPKPREVQSI SSIIDELDSR LVVGQVVKSV  60
EDAYFLYCDY AHAKGFSIRK GDQPYFPCSN ELQAKEFECS CGGPTIKTKC KARPRIGQEK  120
EEEWKVTRFV MEHNHEIGEV DQTYLLRSSR NLSNAQKSTL EAMVNAGIYV ASAVSYMEEK  180
AHGPENLRFT RKDAYDYIRS LKKHRKSNNE PYFYWDAQLD DDNRVMNFFF RDYRCRIDYE  240
SFGDVLSVDT TYRTNRYNLI MCSFCGLWQW HINQSAPSHL EKLNCDSRLK QLWNKCRTYC  300
DSKEEFEETD HKWLNGMYKL RHNWATTFSN TRFSARLLAT SRSEGTNSML KKANNRTISL  360
YDFFVEDPSF VGPFFILFKV KSLNQYSRIR NVWLNKQKNV VKCSCYKFDS MGILCKHALK  420
VLNHVKVHSL PKQYIKKRWM KSMRNRDARS MLTKILHNTQ EKTIVLLENL SLNYLHACDD  480
VVVD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	1e-23	FAR1 family protein