PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN08081.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 304aa    MW: 34463.8 Da    PI: 7.2358
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN08081.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.21.6e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +lv +++++G+g+W++++   g+ R+ k+c++rw +yl
       PIN08081.1 14 KGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding45.71.5e-1467112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T+ E+  ++++ ++lG++ W++Ia +++  Rt++++k++w+++l
       PIN08081.1  67 RGNFTPHEEGMIIHLQALLGNK-WAAIATYLP-QRTDNDIKNYWNTHL 112
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MGRPPCCDKV GIKKGPWTPE EDIILVSYIQ EHGPGNWRAV PTNTGLLRCS KSCRLRWTNY  60
LRPGIKRGNF TPHEEGMIIH LQALLGNKWA AIATYLPQRT DNDIKNYWNT HLKKKLKKFQ  120
MESQMSSDHN SSSYHQFLSK STYFGERSVE KNENNSSIYA SSAENISRLL EGWMRSSSPL  180
QANTNTNRDF GKLSTETSNI STSIQCYRPQ QIEHQGANGI SSDELECMML FDHNFTSMVC  240
DKSSCDCSQK GSEGSGLIDQ GKVHFEHECK PKIDNNPPLS FLEKWLLDEN ASQVEGVMEL  300
PSIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.11e-101MYB family protein