PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN07859.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB_related

Protein Properties

Length: 973aa MW: 109965 Da PI: 7.9641

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN07859.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.5	3.1e-08	848	895	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E +l+d+v ++G g+W++I + + +Rt ++k++w+++l PIN07859.1 848 WTIAEVRKLIDGVSEYGVGRWSRIKKLFFsasAHRTSVDLKDKWRNLL 895 999*******************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 973 aa Download sequence
MVMENGPPTI GFEDGTIDVE RLLVEPQDGH VSVDSVMCFN EKIPDSAMRM DDVSRSFGVS 60 NTGIAQQGED ILNRDVLDSM HNEVGYFRLQ NDFCSMGEEY LLGVEFAESI TNLDYGSSEA 120 LQTSVSDNPI LASTAGIDTS WKEDLFRIME VPKCQNNQLI VETSEFGEIP NRCPEAKPLK 180 TPTSCTLRDI DKFQDISSCS FQDILSDEND TSLSPSVEML CSPKNEKIDE SVSTGQNETK 240 RFHGEDALVT MSAQASSADA VPTQKRSRKP TQRYIDELAD PILRLPKKKR EGSSSTLKDK 300 SQGVKDHKKF HTGSRAMKLP AEESSVKAIQ VPFASLVHKE CPKSPTHDMV RRSDRGHLLT 360 KSKDNHVTPE HLKRDEFPAI HQKKRDHSER AANQKKKDDT CNPAYLKKTD DRLTAPSQKK 420 RNDFIPAVSP KKRDDCLTAI RQKKRDEYFA EESPEEVLDS MHNEVGYFRL QNDFCSMGEE 480 YLLGVEFAES ITNLDYGSSE ALQTSVSDNP ILASTAGIDT SWKEDLFRIM EVPKCQNNQL 540 IVETSEFGEI PNRCPEAKPL KTPTSCTLRD IDKFQDISSC SFQDILSDEN DTSLSPSVEM 600 LCSPKNEKID ESVSTGQNET KRFHGEDALV TMSAQASSAD AVPTQKRSRK PTQRYIDELA 660 DPILRLPKKK REGSSSTLKD KSQGVKDHKK FHTGSRAMKL PAEESSVKAI QVPFASLVHK 720 ECPKSPTHDM VRRSDRGHLL TKSKDNHVTP EHLKRDEFPA IHQKKRDHSE RAANQKKKDD 780 TCNPAYLKKT DDRLTAPSQK KRNDFIPAVS PKKRDDCLTA IRQKKRDEYF AEESPEEVSG 840 RRKHHRLWTI AEVRKLIDGV SEYGVGRWSR IKKLFFSASA HRTSVDLKDK WRNLLKASGI 900 QGQGNRQGEK KRNLAWRPLP KSILRRVCEL ASMYPYPKGR KPKIPHINHD SPDRSTDITL 960 SDYRRILRSI NGN

Sequence ? help Back to Top

Protein Sequence Length: 973 aa Download sequence

MVMENGPPTI GFEDGTIDVE RLLVEPQDGH VSVDSVMCFN EKIPDSAMRM DDVSRSFGVS  60
NTGIAQQGED ILNRDVLDSM HNEVGYFRLQ NDFCSMGEEY LLGVEFAESI TNLDYGSSEA  120
LQTSVSDNPI LASTAGIDTS WKEDLFRIME VPKCQNNQLI VETSEFGEIP NRCPEAKPLK  180
TPTSCTLRDI DKFQDISSCS FQDILSDEND TSLSPSVEML CSPKNEKIDE SVSTGQNETK  240
RFHGEDALVT MSAQASSADA VPTQKRSRKP TQRYIDELAD PILRLPKKKR EGSSSTLKDK  300
SQGVKDHKKF HTGSRAMKLP AEESSVKAIQ VPFASLVHKE CPKSPTHDMV RRSDRGHLLT  360
KSKDNHVTPE HLKRDEFPAI HQKKRDHSER AANQKKKDDT CNPAYLKKTD DRLTAPSQKK  420
RNDFIPAVSP KKRDDCLTAI RQKKRDEYFA EESPEEVLDS MHNEVGYFRL QNDFCSMGEE  480
YLLGVEFAES ITNLDYGSSE ALQTSVSDNP ILASTAGIDT SWKEDLFRIM EVPKCQNNQL  540
IVETSEFGEI PNRCPEAKPL KTPTSCTLRD IDKFQDISSC SFQDILSDEN DTSLSPSVEM  600
LCSPKNEKID ESVSTGQNET KRFHGEDALV TMSAQASSAD AVPTQKRSRK PTQRYIDELA  660
DPILRLPKKK REGSSSTLKD KSQGVKDHKK FHTGSRAMKL PAEESSVKAI QVPFASLVHK  720
ECPKSPTHDM VRRSDRGHLL TKSKDNHVTP EHLKRDEFPA IHQKKRDHSE RAANQKKKDD  780
TCNPAYLKKT DDRLTAPSQK KRNDFIPAVS PKKRDDCLTA IRQKKRDEYF AEESPEEVSG  840
RRKHHRLWTI AEVRKLIDGV SEYGVGRWSR IKKLFFSASA HRTSVDLKDK WRNLLKASGI  900
QGQGNRQGEK KRNLAWRPLP KSILRRVCEL ASMYPYPKGR KPKIPHINHD SPDRSTDITL  960
SDYRRILRSI NGN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	840	847	GRRKHHRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	5e-26	MYB_related family protein