PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN07825.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB_related

Protein Properties

Length: 402aa MW: 44274.9 Da PI: 7.8933

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN07825.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.6	4.3e-11	349	396	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 rW+ E++ l +vk++G+g+Wk I + Rt+ ++k++w++ PIN07825.1 349 RWSLLEEDTLRTGVKKYGKGNWKVILTSYRdifQDRTEVDLKDKWRNM 396 9*********************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MKGAYCAVAV DCTVKVLRNG DDGGNSSKFK FFEAVKRVWR GRIGRMEKVV EKGGLGSEEL 60 WVWKDEVEAA VWDDSVCESV VKKSEGVNSV EAVNAYLKEE REKMGPSFLE LVAARVKDDE 120 VMLGMLGGGI VDGGAEKEAP SCPAGQVVDV SGVNNGNNET QKKKIHLRSK LVGLRHVRGS 180 ASGNSRGAKI VDSDEMTTGP SHRNYNLPCS AEVNKVREAL ESSSLELQAV VKDPLPDALR 240 LAEAVSGTAR KNKSNDPAEE NHVAANPLIV DGAGVVQESG SNVNDVPKPS LMERNGSAHT 300 YEWDDSIDGS EEEPDHRGRL LLPSPRMVNV SPLNKYEIKN LKRRRKGRRW SLLEEDTLRT 360 GVKKYGKGNW KVILTSYRDI FQDRTEVDLK DKWRNMTRNG ST

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MKGAYCAVAV DCTVKVLRNG DDGGNSSKFK FFEAVKRVWR GRIGRMEKVV EKGGLGSEEL  60
WVWKDEVEAA VWDDSVCESV VKKSEGVNSV EAVNAYLKEE REKMGPSFLE LVAARVKDDE  120
VMLGMLGGGI VDGGAEKEAP SCPAGQVVDV SGVNNGNNET QKKKIHLRSK LVGLRHVRGS  180
ASGNSRGAKI VDSDEMTTGP SHRNYNLPCS AEVNKVREAL ESSSLELQAV VKDPLPDALR  240
LAEAVSGTAR KNKSNDPAEE NHVAANPLIV DGAGVVQESG SNVNDVPKPS LMERNGSAHT  300
YEWDDSIDGS EEEPDHRGRL LLPSPRMVNV SPLNKYEIKN LKRRRKGRRW SLLEEDTLRT  360
GVKKYGKGNW KVILTSYRDI FQDRTEVDLK DKWRNMTRNG ST

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	342	367	KRRRKGRRWSLLEEDTLRTGVKKYGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	2e-14	MYB_related family protein