PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN07650.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GATA
Protein Properties Length: 336aa    MW: 36629.2 Da    PI: 6.9687
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN07650.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.87e-19249282134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C++C++ kTp+WR gp g+ktLCnaCG+++++ +
  PIN07650.1 249 CTHCHVQKTPQWRTGPLGPKTLCNACGVRFKSGR 282
                 *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MECIEARALK SSFLSQMAMK TNSQVFYNDD GWCLTGINTV GCDDFPVEDL LNLDFPEKEF  60
QDGCFLQEDE GSLKGSSINS SSSSIFSGAD DFDSLSAGEL GVPVDDLENL EWLSQFVDDS  120
TTTGLSLLCP AGSVPAKFGG NSGNRVEPVK RPPQKIRASS FPVPVTRKPR SKSLRSKGRP  180
WSLASPPLSA VMDSSSTPSS SYGSSPLSPL VFLNPVHDTE WFSSVEKPPA KKQKRKPEAE  240
TGSISGRRCT HCHVQKTPQW RTGPLGPKTL CNACGVRFKS GRLFPEYRPA CSPTFSQEMH  300
SNSHRKVLEM RRKKEMAGLV EPESGESGLP EAVQSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.23e-51GATA family protein