PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN07620.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 163aa    MW: 18871.8 Da    PI: 8.4861
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN07620.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.48.5e-161194193
                EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
          B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelv 93
                ffk++     + ++ lvlp  f+++ +++  ++k  +l++++g +++v++  +k++++ ++++kGWk+F++ n+L+ gD +vF+++g  +f  +
  PIN07620.1 11 FFKIM--LPGF-HDKLVLPPAFCRKLKEE--KPKHAILRSPRG-TMKVNI--CKNDKGlIYFKKGWKDFADLNDLCIGDAIVFEHTGGLNF--N 94
                56666..3344.566********999755..6778*****998.799999..7777777*************************8775444..4 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MDEKYGVTRH FFKIMLPGFH DKLVLPPAFC RKLKEEKPKH AILRSPRGTM KVNICKNDKG  60
LIYFKKGWKD FADLNDLCIG DAIVFEHTGG LNFNAIVFDP SACEKQFPEK VNLDEHPEDV  120
ESWYKFYTSN KLKDGDVCTF ELHPHSRRSK TVVMDVHINR SSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.11e-15B3 family protein