PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN07416.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | ERF | ||||||||
Protein Properties | Length: 247aa MW: 27541 Da PI: 5.2838 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63 | 6.3e-20 | 122 | 172 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp+++g r++lg+f+ta Aaka+++a+ k++g PIN07416.1 122 HYRGVRRRP-WGKYAAEIRDPTSRG--SRVWLGTFDTAVAAAKAYDKAAFKMRG 172 8********.***********8876..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MANPAEVSAV ERIRIHLLGE FSTGELDNDA STSGTLASSV ASSEFDSLYS QLSTCDSGLS 60 IPDNSLGLQQ NQVNNSLIID LTTPKAKPSL RIEVPEAGRQ FELIKFECNA AGEEEEDKEK 120 KHYRGVRRRP WGKYAAEIRD PTSRGSRVWL GTFDTAVAAA KAYDKAAFKM RGSKAILNFP 180 LEIQLQERGA SDVERKRRRE VEEGEIVEFG QLKMGKREAA VKSEITEWEP LTPSFWQLSR 240 YLPILSS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 195 | 199 | RKRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17490.1 | 1e-26 | ERF family protein |