PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN07353.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 148aa    MW: 16644 Da    PI: 6.5348
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN07353.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.91.2e-0538721554
                HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                ++ ++++ L++l+ +      +K + a++L +A+eYI+ L
  PIN07353.1 38 KVSERISALQQLVSPY-----GKTDTASVLLEAMEYIRFL 72
                78899********999.....9****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MMQHKRSPIS IEQSGFMDLI PKRLKTDEPL SSKEKKEKVS ERISALQQLV SPYGKTDTAS  60
VLLEAMEYIR FLHEQVKVLS APYLYSTPAE SQDDEPWSLN AKGLCLVPIS FTVGIARSNG  120
ADIWAPIKTS PNNSRRLIYD ETSEITQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.34e-47bHLH family protein