PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN07335.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NF-YA | ||||||||
Protein Properties | Length: 208aa MW: 23213.9 Da PI: 9.1909 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 103.3 | 2.2e-32 | 113 | 169 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep++VNaKQy++Il+RRq+Rak+e+e+kl ++srkpylheSRh hAlrR+Rg+gGrF PIN07335.1 113 EEPVFVNAKQYHGILRRRQSRAKAESENKL-SRSRKPYLHESRHLHALRRARGNGGRF 169 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MTSSVHSLSD NSEANEQQKH ADSLVQPSSP ANAMSHPGVA SPTMQYAAPA HLGVGNVMAQ 60 TTYPYPDPYY RSIFAPYDTQ PYPAQPYPPQ QMVHLQLMGI QQAGVPLPSE AVEEPVFVNA 120 KQYHGILRRR QSRAKAESEN KLSRSRKPYL HESRHLHALR RARGNGGRFQ KKSENQIKED 180 ESSEKSLDNI NLQCEKDGRK KVPPDDAA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.2 | 3e-64 | NF-YA family protein |