PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN07223.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HRT-like

Protein Properties

Length: 347aa MW: 38948.9 Da PI: 9.8683

Description

HRT-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN07223.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HRT-like	49.2	8.5e-16	314	344	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCG+il++Gs+C+r+P k +KRC eHKG+Ri PIN07223.1 314 ICGFILDNGSPCRRKPDKRNKRCLEHKGRRI 344 8*****************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MPTTSSSTTS DRLKREDSRR TKHDSAFSQW KLGKEGVERY RTQNLPNWIS CPGVYELGIA 60 ASGPSYVVPV YIGQADNLRT RLQRYGRDGA HLENGCSTDK HTNCQSVSSN KGPGLFTDIF 120 SRGLPIVYRC ARMESKKDAE ITEKQLLDKF DYAWNKGSKG ARRPDDICKK LDRFEKASQF 180 SLLAKKLLDF NQKQVGIKIK TCKPSSWQNE SNLSDTNNNV NFSRIHGIRR FQPGQQQCGS 240 GDSCTDKSDI CGVVIGHGSV CTAPPLNAEG KIPPTAASMG SDIIHDRHNA DFQDWRLSQP 300 RTTEHPPMEK FAPICGFILD NGSPCRRKPD KRNKRCLEHK GRRIRVS

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MPTTSSSTTS DRLKREDSRR TKHDSAFSQW KLGKEGVERY RTQNLPNWIS CPGVYELGIA  60
ASGPSYVVPV YIGQADNLRT RLQRYGRDGA HLENGCSTDK HTNCQSVSSN KGPGLFTDIF  120
SRGLPIVYRC ARMESKKDAE ITEKQLLDKF DYAWNKGSKG ARRPDDICKK LDRFEKASQF  180
SLLAKKLLDF NQKQVGIKIK TCKPSSWQNE SNLSDTNNNV NFSRIHGIRR FQPGQQQCGS  240
GDSCTDKSDI CGVVIGHGSV CTAPPLNAEG KIPPTAASMG SDIIHDRHNA DFQDWRLSQP  300
RTTEHPPMEK FAPICGFILD NGSPCRRKPD KRNKRCLEHK GRRIRVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56780.1	1e-61	HRT-like family protein