PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN06869.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 685aa MW: 78867 Da PI: 8.2471

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN06869.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	71.1	2.6e-22	78	161	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Yn YA e+GFsvr+++s +++++e + + ++Cs +g+++ ++ + r r+etrtgC a++++++ ++++w++ ++ leHnH l PIN06869.1 78 NYYNCYALEAGFSVRVKNSWFKRNSREKYGAVLCCSSQGFKRVKDVN-----RLRKETRTGCPAMMRMRLVDSKRWRILEVTLEHNHLL 161 69**************************************99988.....99*******************************76 PP

Sequence ? help Back to Top
Protein Sequence Length: 685 aa Download sequence
MITPGLWRSF LTSMEEMSLQ TEQTRDGLGC GTPPETSDQK TALDGQNGIL EAGTLEGRKE 60 FVPPAVGMEF ESYDDAYNYY NCYALEAGFS VRVKNSWFKR NSREKYGAVL CCSSQGFKRV 120 KDVNRLRKET RTGCPAMMRM RLVDSKRWRI LEVTLEHNHL LGGKGCKSIK KMGSGTKRKL 180 LPNSDPEIQP IKLYRALVID AGGDGSSNFN LKQVKTASDQ PNQLNLRKGD TQAMYNYFCR 240 MQLTNPNFFY SVDLDEEGRL RNVFWIDAWS RAANGYFSDV IFFDNTCLSN KYEVPLVTFV 300 GVNHHGQSVL LGCGLLASET KESYVWFFKA WLTCTSGHFP QTIITDRCKV LQSAVADVFP 360 KSNHRFGLSH IMRKIPEKLG GLRNYDAIRK ALLKGVYEAL KPFDFEAAWG FMIQHFGVAD 420 NEWLRSLYDD RAQWAPIYLK DTFFMGMAAA QPGETLNPFF DKYLHKQTPL KEFLDKYELA 480 LQKKHKEEVN ADMESRNSSP ELKTRCSFEL QLSKVYTRAI FRKFQLEVEE MYSCFSTTQI 540 HNDGAITIFL VKERVLHEGN RREIKDFEVL FNRAATEVRC ICSCFNFYGY LCRHALCVLN 600 FNGVEEIPSK YILSRWKKDY KRLYIQDSGA DNSETSKQLQ WFDQLYRSAL QVVEEGVISL 660 DHYKVALRAL EESLDRVHGI EEKHV

Sequence ? help Back to Top

Protein Sequence Length: 685 aa Download sequence

MITPGLWRSF LTSMEEMSLQ TEQTRDGLGC GTPPETSDQK TALDGQNGIL EAGTLEGRKE  60
FVPPAVGMEF ESYDDAYNYY NCYALEAGFS VRVKNSWFKR NSREKYGAVL CCSSQGFKRV  120
KDVNRLRKET RTGCPAMMRM RLVDSKRWRI LEVTLEHNHL LGGKGCKSIK KMGSGTKRKL  180
LPNSDPEIQP IKLYRALVID AGGDGSSNFN LKQVKTASDQ PNQLNLRKGD TQAMYNYFCR  240
MQLTNPNFFY SVDLDEEGRL RNVFWIDAWS RAANGYFSDV IFFDNTCLSN KYEVPLVTFV  300
GVNHHGQSVL LGCGLLASET KESYVWFFKA WLTCTSGHFP QTIITDRCKV LQSAVADVFP  360
KSNHRFGLSH IMRKIPEKLG GLRNYDAIRK ALLKGVYEAL KPFDFEAAWG FMIQHFGVAD  420
NEWLRSLYDD RAQWAPIYLK DTFFMGMAAA QPGETLNPFF DKYLHKQTPL KEFLDKYELA  480
LQKKHKEEVN ADMESRNSSP ELKTRCSFEL QLSKVYTRAI FRKFQLEVEE MYSCFSTTQI  540
HNDGAITIFL VKERVLHEGN RREIKDFEVL FNRAATEVRC ICSCFNFYGY LCRHALCVLN  600
FNGVEEIPSK YILSRWKKDY KRLYIQDSGA DNSETSKQLQ WFDQLYRSAL QVVEEGVISL  660
DHYKVALRAL EESLDRVHGI EEKHV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	0.0	FAR1 family protein