PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN06825.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GATA
Protein Properties Length: 348aa    MW: 38001.3 Da    PI: 5.905
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN06825.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.81.6e-19267301135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++Cg+tkTp+WR gp g ktLCnaCG+++++ +l
  PIN06825.1 267 CTHCGVTKTPQWRAGPLGAKTLCNACGVRFKSGRL 301
                 *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MLHPTRHHPF LFRFSPFSQS SSSLSPHFVP FPSSRFQEME SVQGDLKSGF GPETAAKTAV  60
VVDDFLGVNG GAGDDFFVDE LLDFSNGYCE NIEEQPPQTE EPTPEKEQGS EKESTEPPES  120
GALSLKDDFG SLHESEFGVQ EEGLESLEWL SQFVEESFSD YSLTGKLPPD NKSEPVVEVK  180
VQEQPCFKTP VQTKARTKRA RSGVRVWPVL SPSFTESSTS SSSSTSSTTS FSLSQTDSSS  240
LGKLPAKKQK KKPADGGGAG AAQPRRCTHC GVTKTPQWRA GPLGAKTLCN ACGVRFKSGR  300
LLPEYRPACS PTFSSELHSN NHRKVIEMRR KKELEMEAAG LAPPVQSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G51080.18e-43GATA family protein