PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN06806.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 321aa    MW: 35954.1 Da    PI: 4.6356
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN06806.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.21.1e-11156198754
                 HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                 ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  PIN06806.1 156 MAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 198
                 79*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MELTQHTLLE ELILPPKIDN ITTWTSFPNE LIFPNSIYPF DQIPDFHLPI PTNPSLLELI  60
SAPPDQLIST EPSGFVDILT LPAELSSNYD VQAMPVYSNE VENTEFGFVD VNAVNGLDSS  120
FVVETTNTDS TVYVGEKKVN GKISKKGNGL PSKNLMAERR RRKRLNDRLS MLRSIVPKIS  180
KMDRTSILGD TIDYMKELLD KIHKLREQGM EEGDLSLIGN YFKELKPNEM LVSNPPKFDV  240
ERRNEETRVE VCCTAKPGLL ISTLTTMDAL GLDIHQCVIS CFNDFSLQAS CFEAAENRSL  300
VGVEDVKQAL FRSAGYGGRC L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1158165ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.11e-70bHLH family protein