PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN06792.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 296aa MW: 33342.5 Da PI: 6.7211

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN06792.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	66.7	4.2e-21	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d+++++G g+W ++a++ g++R++k+c++rw +yl PIN06792.1 14 KGPWTPEEDQKLIDCIQKHGQGNWQLVAKKAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	54.2	3.4e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++++E+++++d++ lG++ W+ Ia +++ gRt++++k++w+++ PIN06792.1 67 RGNFSPQEEQIIIDLHSALGNK-WSVIATHLP-GRTDNEIKNFWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MVRSPIKNDQ GLKKGPWTPE EDQKLIDCIQ KHGQGNWQLV AKKAGLNRCG KSCRLRWTNY 60 LRPDIKRGNF SPQEEQIIID LHSALGNKWS VIATHLPGRT DNEIKNFWNT HIRKKLLRSG 120 IDPNTHQPVT DHLNLPSNLN NLFINPLENL VKIQLLRQIL QVLNANPLPG YSGTLNHFPG 180 TYDTTSLNLL QVPNPENANL LTNYPEPVLD NSGMIREGKN SGNSEKWLPG LVPATSEISS 240 GDKVNSDDYS LKVENYQNMF SYKDYDAAGI AHLDDDEASS SFWKDILDES FLASSM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	3e-78	MYB family protein