PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN06611.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ARF
Protein Properties Length: 469aa    MW: 52268.2 Da    PI: 7.7044
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN06611.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B377.51.5e-24114216199
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f kvltpsd+++ g +++p+ +ae +        +++ +   l+l+d+ ++ We+++iyr++++r++lt+GW++Fv+a++L +gD+vvF+ ++rs+ el
  PIN06611.1 114 FAKVLTPSDANNGGGFSVPRFCAELIfpeldftAEPPVQ--NLILKDTFNNAWEFRHIYRGTPRRHLLTTGWSKFVNAKHLVAGDSVVFM-KKRSTNEL 209
                 89*****************9888777****997666666..6************************************************.5569999* PP

                 EEEEE-S CS
          B3  93 vvkvfrk 99 
                 +++v+r+
  PIN06611.1 210 FIGVRRA 216
                 *****97 PP
2Auxin_resp80.93e-27230310183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 
                 a+++a+ +++FevvY+Pr + ++Fvvk+e ve+al++++svGmR++ma+et++ +++++ +Gtv+  +      W +S+Wr+L+
  PIN06611.1 230 AIQNAERGMPFEVVYYPRFGLPDFVVKAEMVEEALRMHWSVGMRVRMAVETDELPRKTWfQGTVAVAHG---GPWFGSPWRMLQ 310
                 5678999****************************************************99**998887...56********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 469 aa     Download sequence    
MAGPSSSAPP IPAAELDVSV WRAIAGASVQ IPSLNSYVYY FPQGHLEHFS SSAFLQNSSF  60
TLSRPMILCQ VLSVRFLCNL NDQVFVRLIL QPLEQRHMDN RNHDDNNQND VVSFAKVLTP  120
SDANNGGGFS VPRFCAELIF PELDFTAEPP VQNLILKDTF NNAWEFRHIY RGTPRRHLLT  180
TGWSKFVNAK HLVAGDSVVF MKKRSTNELF IGVRRASRFG GYDGQDVGEA IQNAERGMPF  240
EVVYYPRFGL PDFVVKAEMV EEALRMHWSV GMRVRMAVET DELPRKTWFQ GTVAVAHGGP  300
WFGSPWRMLQ VTWDEPESLL NVNRVSPWQV EYVRPTPLLD SIVPAPKRSR LLQNPTMLPT  360
AEHLNMGVFN NAPLSADMQG ARRGHILTPG TSSANNELRT MGIERDQRTT VSTVLSVGSP  420
YPDNLSASSS SVHFCGTDLR LSQPGYSSST KVGSSSFQLF GKVIQTSES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77850.11e-115ARF family protein