PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN06377.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NF-YB | ||||||||
Protein Properties | Length: 230aa MW: 25882.2 Da PI: 5.7081 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 152.7 | 6.6e-48 | 45 | 140 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 r+ d+++Pianv+rim++vlP+naki++daket+qecvsefisfvtsea++kc++e rkti+++d+l al tlGf++yvepl+++l+kyr ++e+ PIN06377.1 45 RDPDQYMPIANVTRIMRRVLPSNAKIADDAKETIQECVSEFISFVTSEANEKCHKEYRKTITSEDVLSALRTLGFDNYVEPLTIFLNKYRAEDSER 140 688***************************************************************************************877765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MESEGNSNLQ QKYPTKASSS GMVIDATTNI PTDANTVNLE QIFKRDPDQY MPIANVTRIM 60 RRVLPSNAKI ADDAKETIQE CVSEFISFVT SEANEKCHKE YRKTITSEDV LSALRTLGFD 120 NYVEPLTIFL NKYRAEDSER NPHPLPFMRH ATRYVQQPVV PMAQPPPSPP LPPPSFIMNY 180 GRAQLATTYT MDQTNYVEIP PMNVYKFMGN QGGGEGASSS LEIDAHRPFK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21970.1 | 1e-48 | NF-YB family protein |