PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN06276.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 401aa    MW: 45095.4 Da    PI: 6.5313
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN06276.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.11.2e-19189239256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++ + kl+ge
  PIN06276.1 189 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALAYDREAFKLRGE 239
                 59******9.**********955...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    
MDSGKDKGKS KKITQMDWEK DEGRDLERQQ WNPVFDEGSM SNRPLKKVKS PERQEDPFPP  60
SSSSSSSSQQ TVPNPSVSLP QSMPFPPPYS NFVFPFAFDN SQPSTTVPLY QPPPQQMISF  120
TPPHQNFSFP PYFAAEAAAA APSQQQLMQY WSDAWNSSPK GRMMMINKLG PNGRALLRPP  180
FSPLSTTKLY RGVRQRHWGK WVAEIRLPRN RTRLWLGTFD TAEEAALAYD REAFKLRGEN  240
ARLNFPELFI GKDKEATPSS SSPNQESGNV PASDEELPQN KNPEATESEQ VRRNVESSRG  300
GESVSPSSEL VWGDMSEAWF DSIPAAWGPG SPVWDNLDAN NNLLLPPNFP PFGNINQEEN  360
KETNTPWILI FHNISSMASM GKQISCRRLH ITGHLLHFSC L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.12e-54ERF family protein