PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN06133.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 551aa MW: 60310.2 Da PI: 5.9767

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN06133.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57	4.3e-18	39	86	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed++l+++v+++G g+W+++ ++ g+ R++k+c++rw ++l PIN06133.1 39 KGPWTSAEDKILIEYVTKHGEGNWNAVQKHSGLARCGKSCRLRWANHL 86 79******************************************9986 PP
2	Myb_DNA-binding	43.8	5.8e-14	92	135	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+ T eE+ ++++++ + G++ W++ a++++ gRt++++k++w++ PIN06133.1 92 KGAITSEEENRIIELHYKIGNK-WARMAAELP-GRTDNEIKNYWNT 135 6788****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 551 aa Download sequence
MSMTSESDER IIPNNGVDST SVDDANSGGN VGPNGPLKKG PWTSAEDKIL IEYVTKHGEG 60 NWNAVQKHSG LARCGKSCRL RWANHLRPDL KKGAITSEEE NRIIELHYKI GNKWARMAAE 120 LPGRTDNEIK NYWNTRIKRL QRAGLPVYPP HICSKQSSEN QQSENMNTLS SGNVHHPNFV 180 PVNSFDIPAV EFKCLKLNQQ LYSPELLNMP PNSLLDIPES GLLAEGLHPS YPNKSLLSTV 240 QPSKRLRGSN PLFPSLNAPI GNPVTGGNLY QGDGSMQIAQ SFIFSSGYDL STSDHLLSSS 300 LLPGSHAVLN GNPSSEPAWA MKLELPSLQT QMGTWGSPSP SSPLPFFESV DNLIQSPLTE 360 HMQPCNLPSP NSGLLDAVLY ESETMKNSNN NRCQQISSSS NMTVDTIDKA THDLCQTEWE 420 AYDDQISPLG HSCSSIHSVS TPNSLDEPHS AESVPGCKVK EESRNLVPMQ YNDKVETTNE 480 ALFPRPDFLL GSYCFSPMKH GTNDHSHRKD AIGTLLGDDL SRDCKQTDTG STSSGQVHGH 540 DSCAWNAMPT I

Sequence ? help Back to Top

Protein Sequence Length: 551 aa Download sequence

MSMTSESDER IIPNNGVDST SVDDANSGGN VGPNGPLKKG PWTSAEDKIL IEYVTKHGEG  60
NWNAVQKHSG LARCGKSCRL RWANHLRPDL KKGAITSEEE NRIIELHYKI GNKWARMAAE  120
LPGRTDNEIK NYWNTRIKRL QRAGLPVYPP HICSKQSSEN QQSENMNTLS SGNVHHPNFV  180
PVNSFDIPAV EFKCLKLNQQ LYSPELLNMP PNSLLDIPES GLLAEGLHPS YPNKSLLSTV  240
QPSKRLRGSN PLFPSLNAPI GNPVTGGNLY QGDGSMQIAQ SFIFSSGYDL STSDHLLSSS  300
LLPGSHAVLN GNPSSEPAWA MKLELPSLQT QMGTWGSPSP SSPLPFFESV DNLIQSPLTE  360
HMQPCNLPSP NSGLLDAVLY ESETMKNSNN NRCQQISSSS NMTVDTIDKA THDLCQTEWE  420
AYDDQISPLG HSCSSIHSVS TPNSLDEPHS AESVPGCKVK EESRNLVPMQ YNDKVETTNE  480
ALFPRPDFLL GSYCFSPMKH GTNDHSHRKD AIGTLLGDDL SRDCKQTDTG STSSGQVHGH  540
DSCAWNAMPT I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.3	2e-81	MYB family protein