PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN06006.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HSF

Protein Properties

Length: 361aa MW: 41978.2 Da PI: 4.6193

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN06006.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.1	1.9e-35	43	135	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y+ ++d+++++++sws+ +nsf+v+d+++fa ++Lp+yFkh+nf+SFvRQLn+YgF+k + ++ weF+++ F +g+++ll++ik PIN06006.1 43 FLSKTYDFVDDPNTNHIVSWSKGNNSFIVWDPQTFAINLLPRYFKHNNFSSFVRQLNTYGFRKFDPDK---------WEFANEGFLRGHRHLLKNIK 130 9**************************************************************999.........**************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+k++ PIN06006.1 131 RRKTT 135 986 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MNPIEEIKEE FLGSNSVYSE EPLMDANVPQ PMEGLHETGP PPFLSKTYDF VDDPNTNHIV 60 SWSKGNNSFI VWDPQTFAIN LLPRYFKHNN FSSFVRQLNT YGFRKFDPDK WEFANEGFLR 120 GHRHLLKNIK RRKTTSHFQT SNQGLESCVE VGRFGLDLEI DRLRRDKQVL MVELVKLRQQ 180 QQNAISCLKE MEQRLKRTEL KQQQTMNFLA RAIQNPSFLQ KIVQQKERMK ELEDAVGNKR 240 KKRIDLGSSN TCMNIEMNDE VKLEPQGFGE ISGFDVELER LGMNIEGTSM NMDEQILEKN 300 DDLEKNFAVD QKSFDEEFWG DLINEGIKDE IDTFGVEGQL DDEIVDVFAE QMEFLGDSSP 360 R

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MNPIEEIKEE FLGSNSVYSE EPLMDANVPQ PMEGLHETGP PPFLSKTYDF VDDPNTNHIV  60
SWSKGNNSFI VWDPQTFAIN LLPRYFKHNN FSSFVRQLNT YGFRKFDPDK WEFANEGFLR  120
GHRHLLKNIK RRKTTSHFQT SNQGLESCVE VGRFGLDLEI DRLRRDKQVL MVELVKLRQQ  180
QQNAISCLKE MEQRLKRTEL KQQQTMNFLA RAIQNPSFLQ KIVQQKERMK ELEDAVGNKR  240
KKRIDLGSSN TCMNIEMNDE VKLEPQGFGE ISGFDVELER LGMNIEGTSM NMDEQILEKN  300
DDLEKNFAVD QKSFDEEFWG DLINEGIKDE IDTFGVEGQL DDEIVDVFAE QMEFLGDSSP  360
R

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	126	132	LKNIKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-119	HSF family protein