PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN05978.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 278aa    MW: 30318.9 Da    PI: 10.4345
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN05978.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.32.5e-20136185255
         AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr ++ +grW AeIrd       r r++lg+f+taeeAa+a++aa+++l+g
  PIN05978.1 136 NYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDAAARRLRG 185
                 59*******.**********32....25*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MNRNSSQMLP NAPFFPKLEF FQQSQMLHQF SFDPNFPSSF RSFSPDTAPA MSHPQTQNRI  60
SDDENRCRNQ NPPVLEGIAA IVGEHVLFGD SGKTEKNYCG SKENETAAGE SLREEAENQR  120
NGGCGGGGGD VGVKKNYRGV RKRPWGRWSA EIRDRIGRCR HWLGTFDTAE EAARAYDAAA  180
RRLRGSKART NFQIPSFLPV PSTSSSNSSC ETKKRRVING KAGKVKGGVS KKCTVVTSMA  240
HLFGPVRESN GGSVSLELGL KVGGGLSSER TRASSMVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.14e-25ERF family protein