PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN05953.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family HSF
Protein Properties Length: 276aa    MW: 31891 Da    PI: 6.3839
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN05953.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind110.31.4e-34171082102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   F++k+y++++d+ +++li w +++nsfvv+++ ef++++Lp yFkh+nf+SFvRQLn+YgF+kv+ ++         weF++++F +g+++ll+ki 
    PIN05953.1  17 FVMKTYQMVSDPPTNRLIGWGKENNSFVVFEPLEFSQRILPLYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEWFLRGQTQLLNKIV 104
                   9****************************************************************999.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+k+
    PIN05953.1 105 RRKH 108
                   *986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MDGMEGSNGN SGIIAPFVMK TYQMVSDPPT NRLIGWGKEN NSFVVFEPLE FSQRILPLYF  60
KHNNFSSFVR QLNTYGFRKV DPDRWEFANE WFLRGQTQLL NKIVRRKHTG RPYNSLIKHE  120
DDEDEELLME ITKLKQEQKS LEQELENMNK RLEATERRPQ QMMTFLYKFV QDPEILPRMM  180
LEKEKTRKLI SDSGEKKRKI MISAASSSSS SGMAMSSSSV KSEDDQEGNN NGETTPISSP  240
EGNLDIDTYC HSSSSLETSS PERLSYRHSF GMPMIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.12e-74HSF family protein