PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN05881.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 193aa    MW: 22004.8 Da    PI: 6.1339
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN05881.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.51.6e-1576168197
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEEEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvkvf 97 
                 f+ vl +s+v +s +l lp + ++e  +    ++ ++    + + W++ +   ++ ++  + +GW++Fv++n+Lk+gD +vF+l+  + ++ +++v+++
  PIN05881.1  76 FDMVLAKSHVQQSFQLQLPARIVRELPKA---TVPVV-LRYNCKNWNLSY--IGNCKAPRFDTGWRNFVNDNNLKSGDACVFELKeCSpENIRFKVHIL 168
                 6678999****************999533...23344.44588*******..99999999***********************9854455556666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MSDPSQADPR RVTVKKEAFS RPYAHVNEET PRMEPLLQQS VERGVRDQQN SKLAEKSEAA  60
ESDEDSIRYL TSETFFDMVL AKSHVQQSFQ LQLPARIVRE LPKATVPVVL RYNCKNWNLS  120
YIGNCKAPRF DTGWRNFVND NNLKSGDACV FELKECSPEN IRFKVHILRG DLPPELATAV  180
ETHGTKDNPI DVD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.11e-10B3 family protein