PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN05747.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 242aa    MW: 27599.1 Da    PI: 5.6619
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN05747.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.23.9e-084262246
                     T-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding 22 gtWktIartmgkgRtlkqcksrwqk 46
                     + W+ Ia+ ++ gRt++++k++w++
       PIN05747.1  4 R-WSIIAAQLP-GRTDNDIKNYWNT 26
                     4.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MINRWSIIAA QLPGRTDNDI KNYWNTRLKK KLLGKQRKET KQTARAKNKN YSNTTFSDSL  60
IYQCPPPILP PIPYSNEDPR SNDHDSIRKL LIKLGGKFSN DHNQVHEEQL KLQYPTIDES  120
AVYNTSIGNS HMIPNYSPQV PMLNASQFDM INGTHIMSTM LLEPLSVNLA AEVYENQQKV  180
QGLEFFCDDV MINSNNGISC EENMVWGEMN SVVFASNNNE GLLQESVMEE FGTDKIMRYG  240
TQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49690.15e-11MYB family protein