PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN05372.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NF-YB | ||||||||
Protein Properties | Length: 173aa MW: 19394.6 Da PI: 4.8394 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 168.2 | 1e-52 | 46 | 141 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +eqdr+lPianv+rimk++lP+nakisk+aket+qecvsefi+fvt+easdkc++ekrkt+ngdd+++al++lGf+dy e lk yl+kyre+egek PIN05372.1 46 KEQDRLLPIANVGRIMKQILPSNAKISKEAKETMQECVSEFIGFVTGEASDKCRKEKRKTVNGDDICFALGSLGFDDYFECLKRYLNKYREFEGEK 141 79********************************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence |
MVDNNIGPKN SHNVAGLTYT NYAAACGAST GGRSEDHDHD QLSVFKEQDR LLPIANVGRI 60 MKQILPSNAK ISKEAKETMQ ECVSEFIGFV TGEASDKCRK EKRKTVNGDD ICFALGSLGF 120 DDYFECLKRY LNKYREFEGE KANQGKASEF NYEDREECDL GPFSPNLMEE RGI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47810.1 | 8e-58 | NF-YB family protein |